Protein–RNA interactions for Protein: P51686

CCR9, C-C chemokine receptor type 9, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9P51686 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.32■□□□□ 0.52
CCR9P51686 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.32■□□□□ 0.52
CCR9P51686 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
CCR9P51686 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCR9P51686 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCR9P51686 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
CCR9P51686 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCR9P51686 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCR9P51686 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CCR9P51686 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.31■□□□□ 0.52
CCR9P51686 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.31■□□□□ 0.52
CCR9P51686 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
CCR9P51686 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCR9P51686 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCR9P51686 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC18.31■□□□□ 0.52
CCR9P51686 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC18.31■□□□□ 0.52
CCR9P51686 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC18.31■□□□□ 0.52
CCR9P51686 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
CCR9P51686 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCR9P51686 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCR9P51686 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCR9P51686 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCR9P51686 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCR9P51686 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCR9P51686 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCR9P51686 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
CCR9P51686 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCR9P51686 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCR9P51686 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCR9P51686 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCR9P51686 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCR9P51686 AC121338.2-201ENST00000622535 1744 ntBASIC18.3■□□□□ 0.52
CCR9P51686 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
CCR9P51686 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCR9P51686 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCR9P51686 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCR9P51686 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
CCR9P51686 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCR9P51686 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCR9P51686 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.3■□□□□ 0.52
CCR9P51686 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCR9P51686 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCR9P51686 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCR9P51686 AL391422.3-201ENST00000603791 2761 ntBASIC18.3■□□□□ 0.52
CCR9P51686 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CCR9P51686 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCR9P51686 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCR9P51686 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.29■□□□□ 0.52
CCR9P51686 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.29■□□□□ 0.52
CCR9P51686 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCR9P51686 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.29■□□□□ 0.52
CCR9P51686 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCR9P51686 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCR9P51686 AC233992.3-201ENST00000607491 485 ntBASIC18.29■□□□□ 0.52
CCR9P51686 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCR9P51686 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCR9P51686 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCR9P51686 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCR9P51686 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCR9P51686 AC055733.4-201ENST00000638462 1354 ntBASIC18.29■□□□□ 0.52
CCR9P51686 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CCR9P51686 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCR9P51686 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
CCR9P51686 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CCR9P51686 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCR9P51686 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCR9P51686 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC18.28■□□□□ 0.52
CCR9P51686 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCR9P51686 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC18.28■□□□□ 0.52
CCR9P51686 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CCR9P51686 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
CCR9P51686 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCR9P51686 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCR9P51686 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCR9P51686 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
CCR9P51686 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CCR9P51686 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCR9P51686 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.27■□□□□ 0.52
CCR9P51686 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.27■□□□□ 0.52
CCR9P51686 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
CCR9P51686 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.27■□□□□ 0.52
CCR9P51686 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC18.27■□□□□ 0.52
CCR9P51686 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCR9P51686 FXN-202ENST00000396364 980 ntTSL 5 BASIC18.27■□□□□ 0.52
CCR9P51686 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCR9P51686 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CCR9P51686 IGHV3-19-201ENST00000521488 291 ntBASIC18.27■□□□□ 0.52
CCR9P51686 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CCR9P51686 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCR9P51686 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCR9P51686 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
CCR9P51686 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.52
CCR9P51686 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CCR9P51686 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.27■□□□□ 0.51
CCR9P51686 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CCR9P51686 PXK-203ENST00000383715 1756 ntTSL 5 BASIC18.27■□□□□ 0.51
CCR9P51686 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCR9P51686 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCR9P51686 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
CCR9P51686 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms