Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLK1P49759 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.45■□□□□ 0.7
CLK1P49759 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CLK1P49759 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.45■□□□□ 0.7
CLK1P49759 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLK1P49759 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.44■□□□□ 0.7
CLK1P49759 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
CLK1P49759 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CLK1P49759 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CLK1P49759 LINC01006-201ENST00000333319 2292 ntBASIC19.44■□□□□ 0.7
CLK1P49759 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLK1P49759 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.44■□□□□ 0.7
CLK1P49759 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.44■□□□□ 0.7
CLK1P49759 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CLK1P49759 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.44■□□□□ 0.7
CLK1P49759 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.44■□□□□ 0.7
CLK1P49759 SMUG1P1-201ENST00000590640 811 ntBASIC19.44■□□□□ 0.7
CLK1P49759 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLK1P49759 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CLK1P49759 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.44■□□□□ 0.7
CLK1P49759 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.44■□□□□ 0.7
CLK1P49759 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLK1P49759 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLK1P49759 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CLK1P49759 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
CLK1P49759 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CLK1P49759 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CLK1P49759 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLK1P49759 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CLK1P49759 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CLK1P49759 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLK1P49759 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLK1P49759 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC19.43■□□□□ 0.7
CLK1P49759 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC19.43■□□□□ 0.7
CLK1P49759 AC105233.4-201ENST00000642045 216 ntBASIC19.43■□□□□ 0.7
CLK1P49759 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLK1P49759 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CLK1P49759 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
CLK1P49759 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLK1P49759 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CLK1P49759 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLK1P49759 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.43■□□□□ 0.7
CLK1P49759 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLK1P49759 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CLK1P49759 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.42■□□□□ 0.7
CLK1P49759 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLK1P49759 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CLK1P49759 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLK1P49759 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLK1P49759 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CLK1P49759 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLK1P49759 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
CLK1P49759 MFF-208ENST00000409616 1247 ntTSL 5 BASIC19.42■□□□□ 0.7
CLK1P49759 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLK1P49759 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.42■□□□□ 0.7
CLK1P49759 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLK1P49759 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CLK1P49759 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.42■□□□□ 0.7
CLK1P49759 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLK1P49759 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CLK1P49759 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLK1P49759 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.41■□□□□ 0.7
CLK1P49759 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLK1P49759 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLK1P49759 IRS3P-201ENST00000223076 1006 ntBASIC19.41■□□□□ 0.7
CLK1P49759 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CLK1P49759 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.41■□□□□ 0.7
CLK1P49759 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.41■□□□□ 0.7
CLK1P49759 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.41■□□□□ 0.7
CLK1P49759 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.41■□□□□ 0.7
CLK1P49759 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CLK1P49759 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.41■□□□□ 0.7
CLK1P49759 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLK1P49759 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLK1P49759 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CLK1P49759 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLK1P49759 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
CLK1P49759 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CLK1P49759 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.41■□□□□ 0.7
CLK1P49759 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLK1P49759 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.41■□□□□ 0.7
CLK1P49759 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.41■□□□□ 0.7
CLK1P49759 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLK1P49759 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLK1P49759 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.4■□□□□ 0.7
CLK1P49759 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLK1P49759 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.4■□□□□ 0.7
CLK1P49759 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLK1P49759 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLK1P49759 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CLK1P49759 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
CLK1P49759 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLK1P49759 AC105265.2-201ENST00000467189 838 ntBASIC19.4■□□□□ 0.7
CLK1P49759 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.4■□□□□ 0.7
CLK1P49759 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.4■□□□□ 0.7
CLK1P49759 AL354811.1-201ENST00000610286 706 ntBASIC19.4■□□□□ 0.7
CLK1P49759 AL358852.1-201ENST00000623174 1268 ntBASIC19.4■□□□□ 0.7
CLK1P49759 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.4■□□□□ 0.7
CLK1P49759 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLK1P49759 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms