Protein–RNA interactions for Protein: P40429

RPL13A, 60S ribosomal protein L13a, humanhuman

Known RBP Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13AP40429 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
RPL13AP40429 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC14.39□□□□□ -0.11
RPL13AP40429 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
RPL13AP40429 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
RPL13AP40429 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
RPL13AP40429 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
RPL13AP40429 DUX4L9-201ENST00000449051 1259 ntBASIC14.39□□□□□ -0.11
RPL13AP40429 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC14.39□□□□□ -0.11
RPL13AP40429 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RPL13AP40429 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RPL13AP40429 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RPL13AP40429 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RPL13AP40429 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RPL13AP40429 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
RPL13AP40429 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC14.39□□□□□ -0.11
RPL13AP40429 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC14.39□□□□□ -0.11
RPL13AP40429 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC14.39□□□□□ -0.11
RPL13AP40429 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
RPL13AP40429 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RPL13AP40429 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC14.39□□□□□ -0.11
RPL13AP40429 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RPL13AP40429 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RPL13AP40429 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC14.38□□□□□ -0.11
RPL13AP40429 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RPL13AP40429 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RPL13AP40429 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
RPL13AP40429 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RPL13AP40429 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RPL13AP40429 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RPL13AP40429 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RPL13AP40429 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RPL13AP40429 AL353803.4-201ENST00000565882 1934 ntBASIC14.38□□□□□ -0.11
RPL13AP40429 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RPL13AP40429 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RPL13AP40429 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RPL13AP40429 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
RPL13AP40429 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RPL13AP40429 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RPL13AP40429 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC14.38□□□□□ -0.11
RPL13AP40429 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC14.38□□□□□ -0.11
RPL13AP40429 Z98882.1-201ENST00000622160 2253 ntBASIC14.38□□□□□ -0.11
RPL13AP40429 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RPL13AP40429 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC14.37□□□□□ -0.11
RPL13AP40429 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC14.37□□□□□ -0.11
RPL13AP40429 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
RPL13AP40429 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
RPL13AP40429 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
RPL13AP40429 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RPL13AP40429 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RPL13AP40429 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC14.37□□□□□ -0.11
RPL13AP40429 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RPL13AP40429 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC14.37□□□□□ -0.11
RPL13AP40429 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC14.37□□□□□ -0.11
RPL13AP40429 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC14.37□□□□□ -0.11
RPL13AP40429 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RPL13AP40429 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RPL13AP40429 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RPL13AP40429 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
RPL13AP40429 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RPL13AP40429 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
RPL13AP40429 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RPL13AP40429 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RPL13AP40429 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
RPL13AP40429 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
RPL13AP40429 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC14.36□□□□□ -0.11
RPL13AP40429 FEM1AP4-201ENST00000443167 1987 ntBASIC14.36□□□□□ -0.11
RPL13AP40429 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RPL13AP40429 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RPL13AP40429 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RPL13AP40429 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RPL13AP40429 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RPL13AP40429 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
RPL13AP40429 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
RPL13AP40429 IDNK-203ENST00000405990 629 ntTSL 2 BASIC14.36□□□□□ -0.11
RPL13AP40429 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC14.36□□□□□ -0.11
RPL13AP40429 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC14.36□□□□□ -0.11
RPL13AP40429 DUX4L18-201ENST00000553347 1267 ntBASIC14.36□□□□□ -0.11
RPL13AP40429 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RPL13AP40429 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
RPL13AP40429 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
RPL13AP40429 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
RPL13AP40429 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
RPL13AP40429 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RPL13AP40429 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC14.36□□□□□ -0.11
RPL13AP40429 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
RPL13AP40429 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC14.35□□□□□ -0.11
RPL13AP40429 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
RPL13AP40429 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
RPL13AP40429 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
RPL13AP40429 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
RPL13AP40429 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
RPL13AP40429 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RPL13AP40429 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
RPL13AP40429 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RPL13AP40429 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RPL13AP40429 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
RPL13AP40429 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RPL13AP40429 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RPL13AP40429 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC14.35□□□□□ -0.11
RPL13AP40429 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms