Protein–RNA interactions for Protein: P38854

TDA11, Topoisomerase I damage affected protein 11, yeastyeast

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TDA11P38854 DNL4YOR005C 2835 nt2.5□□□□□ -2.01
TDA11P38854 VPS64YDR200C 1815 nt2.49□□□□□ -2.01
TDA11P38854 ART10YLR392C 1557 nt2.49□□□□□ -2.01
TDA11P38854 HBT1YDL223C 3141 nt2.49□□□□□ -2.01
TDA11P38854 KHA1YJL094C 2622 nt2.49□□□□□ -2.01
TDA11P38854 RSM24YDR175C 960 nt2.49□□□□□ -2.01
TDA11P38854 YEL010WYEL010W 351 nt2.49□□□□□ -2.01
TDA11P38854 YER138W-AYER138W-A 105 nt2.49□□□□□ -2.01
TDA11P38854 YGR121W-AYGR121W-A 216 nt2.49□□□□□ -2.01
TDA11P38854 ARC18YLR370C 537 nt2.49□□□□□ -2.01
TDA11P38854 YBL107W-AYBL107W-A 105 nt2.49□□□□□ -2.01
TDA11P38854 YDR098C-BYDR098C-B 5268 nt2.49□□□□□ -2.01
TDA11P38854 YDR210C-DYDR210C-D 5268 nt2.49□□□□□ -2.01
TDA11P38854 YDR316W-BYDR316W-B 5268 nt2.49□□□□□ -2.01
TDA11P38854 YDR365W-BYDR365W-B 5268 nt2.49□□□□□ -2.01
TDA11P38854 YER138CYER138C 5268 nt2.49□□□□□ -2.01
TDA11P38854 YER160CYER160C 5268 nt2.49□□□□□ -2.01
TDA11P38854 YGR038C-BYGR038C-B 5268 nt2.49□□□□□ -2.01
TDA11P38854 YGR161C-DYGR161C-D 5268 nt2.49□□□□□ -2.01
TDA11P38854 YJR027WYJR027W 5268 nt2.49□□□□□ -2.01
TDA11P38854 YLR157C-BYLR157C-B 5268 nt2.49□□□□□ -2.01
TDA11P38854 YML039WYML039W 5268 nt2.49□□□□□ -2.01
TDA11P38854 YML045WYML045W 5268 nt2.49□□□□□ -2.01
TDA11P38854 YMR050CYMR050C 5268 nt2.49□□□□□ -2.01
TDA11P38854 YOL103W-BYOL103W-B 5268 nt2.49□□□□□ -2.01
TDA11P38854 YBR012W-BYBR012W-B 5271 nt2.49□□□□□ -2.01
TDA11P38854 YOR142W-BYOR142W-B 5268 nt2.49□□□□□ -2.01
TDA11P38854 YPL257W-BYPL257W-B 5268 nt2.49□□□□□ -2.01
TDA11P38854 YPR158W-BYPR158W-B 5271 nt2.49□□□□□ -2.01
TDA11P38854 SEC26YDR238C 2922 nt2.49□□□□□ -2.01
TDA11P38854 NOP12YOL041C 1380 nt2.49□□□□□ -2.01
TDA11P38854 YPD1YDL235C 504 nt2.48□□□□□ -2.01
TDA11P38854 FIN1YDR130C 876 nt2.48□□□□□ -2.01
TDA11P38854 TIM11YDR322C-A 291 nt2.48□□□□□ -2.01
TDA11P38854 COG7YGL005C 840 nt2.48□□□□□ -2.01
TDA11P38854 DIA1YMR316W 1011 nt2.48□□□□□ -2.01
TDA11P38854 PEX17YNL214W 600 nt2.48□□□□□ -2.01
TDA11P38854 NUM1YDR150W 8247 nt2.48□□□□□ -2.01
TDA11P38854 GIN4YDR507C 3429 nt2.48□□□□□ -2.01
TDA11P38854 YPK1YKL126W 2043 nt2.47□□□□□ -2.01
TDA11P38854 YOR296WYOR296W 3870 nt2.47□□□□□ -2.01
TDA11P38854 BOI1YBL085W 2943 nt2.47□□□□□ -2.01
TDA11P38854 YGL204CYGL204C 306 nt2.47□□□□□ -2.01
TDA11P38854 YJL114WYJL114W 681 nt2.47□□□□□ -2.01
TDA11P38854 ATG19YOL082W 1248 nt2.47□□□□□ -2.01
TDA11P38854 YOR055WYOR055W 435 nt2.47□□□□□ -2.01
TDA11P38854 RRG8YPR116W 834 nt2.47□□□□□ -2.01
TDA11P38854 DAD3YBR233W-A 285 nt2.47□□□□□ -2.01
TDA11P38854 YJL049WYJL049W 1353 nt2.47□□□□□ -2.01
TDA11P38854 HAA1YPR008W 2085 nt2.46□□□□□ -2.01
TDA11P38854 AEP1YMR064W 1557 nt2.46□□□□□ -2.02
TDA11P38854 SAE2YGL175C 1038 nt2.46□□□□□ -2.02
TDA11P38854 ERV1YGR029W 570 nt2.46□□□□□ -2.02
TDA11P38854 YGR111WYGR111W 1203 nt2.46□□□□□ -2.02
TDA11P38854 PEX4YGR133W 552 nt2.46□□□□□ -2.02
TDA11P38854 CDC5YMR001C 2118 nt2.46□□□□□ -2.02
TDA11P38854 RPO41YFL036W 4056 nt2.46□□□□□ -2.02
TDA11P38854 YNL193WYNL193W 1677 nt2.46□□□□□ -2.02
TDA11P38854 DBP10YDL031W 2988 nt2.45□□□□□ -2.02
TDA11P38854 DBF20YPR111W 1695 nt2.45□□□□□ -2.02
TDA11P38854 TVP15YDR100W 432 nt2.45□□□□□ -2.02
TDA11P38854 HPA3YEL066W 540 nt2.45□□□□□ -2.02
TDA11P38854 YHL048C-AYHL048C-A 135 nt2.45□□□□□ -2.02
TDA11P38854 VMA10YHR039C-A 345 nt2.45□□□□□ -2.02
TDA11P38854 FAR3YMR052W 615 nt2.45□□□□□ -2.02
TDA11P38854 ARF3YOR094W 552 nt2.45□□□□□ -2.02
TDA11P38854 CAF120YNL278W 3183 nt2.45□□□□□ -2.02
TDA11P38854 YPL216WYPL216W 3309 nt2.45□□□□□ -2.02
TDA11P38854 YDR261W-BYDR261W-B 5313 nt2.44□□□□□ -2.02
TDA11P38854 YFL002W-AYFL002W-A 5313 nt2.44□□□□□ -2.02
TDA11P38854 YGR161W-BYGR161W-B 5313 nt2.44□□□□□ -2.02
TDA11P38854 YCL019WYCL019W 5313 nt2.44□□□□□ -2.02
TDA11P38854 VAB2YEL005C 849 nt2.44□□□□□ -2.02
TDA11P38854 MIG2YGL209W 1149 nt2.44□□□□□ -2.02
TDA11P38854 YKL066WYKL066W 444 nt2.44□□□□□ -2.02
TDA11P38854 LIP2YLR239C 987 nt2.44□□□□□ -2.02
TDA11P38854 YLR347W-AYLR347W-A 141 nt2.44□□□□□ -2.02
TDA11P38854 VAM3YOR106W 852 nt2.44□□□□□ -2.02
TDA11P38854 UBS1YBR165W 834 nt2.44□□□□□ -2.02
TDA11P38854 CWC22YGR278W 1734 nt2.44□□□□□ -2.02
TDA11P38854 TPS2YDR074W 2691 nt2.44□□□□□ -2.02
TDA11P38854 AYT1YLL063C 1425 nt2.43□□□□□ -2.02
TDA11P38854 YEF3YLR249W 3135 nt2.43□□□□□ -2.02
TDA11P38854 SRD1YCR018C 666 nt2.43□□□□□ -2.02
TDA11P38854 SRB7YDR308C 423 nt2.43□□□□□ -2.02
TDA11P38854 GUK1YDR454C 564 nt2.43□□□□□ -2.02
TDA11P38854 MAM1YER106W 909 nt2.43□□□□□ -2.02
TDA11P38854 YHL006W-AYHL006W-A 354 nt2.43□□□□□ -2.02
TDA11P38854 GOS1YHL031C 672 nt2.43□□□□□ -2.02
TDA11P38854 YHR022CYHR022C 771 nt2.43□□□□□ -2.02
TDA11P38854 CUP1-1YHR053C 186 nt2.43□□□□□ -2.02
TDA11P38854 CUP1-2YHR055C 186 nt2.43□□□□□ -2.02
TDA11P38854 BTS1YPL069C 1008 nt2.43□□□□□ -2.02
TDA11P38854 YPL142CYPL142C 318 nt2.43□□□□□ -2.02
TDA11P38854 MDM10YAL010C 1482 nt2.43□□□□□ -2.02
TDA11P38854 RIM13YMR154C 2184 nt2.43□□□□□ -2.02
TDA11P38854 UBP15YMR304W 3693 nt2.43□□□□□ -2.02
TDA11P38854 YDR034C-CYDR034C-C 1317 nt2.42□□□□□ -2.02
TDA11P38854 YLR410W-AYLR410W-A 1317 nt2.42□□□□□ -2.02
TDA11P38854 SGM1YJR134C 2124 nt2.42□□□□□ -2.02
Retrieved 100 of 7,029 protein–RNA pairs in 21.5 ms