Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NFKB1P19838 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC21.2■□□□□ 0.98
NFKB1P19838 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
NFKB1P19838 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
NFKB1P19838 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
NFKB1P19838 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NFKB1P19838 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NFKB1P19838 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
NFKB1P19838 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
NFKB1P19838 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
NFKB1P19838 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
NFKB1P19838 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
NFKB1P19838 SLC7A5P2-201ENST00000553010 536 ntBASIC21.19■□□□□ 0.98
NFKB1P19838 PLD4-205ENST00000553861 667 ntTSL 2 BASIC21.19■□□□□ 0.98
NFKB1P19838 AC087623.3-201ENST00000607047 1098 ntBASIC21.19■□□□□ 0.98
NFKB1P19838 MIR6821-201ENST00000617625 74 ntBASIC21.19■□□□□ 0.98
NFKB1P19838 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NFKB1P19838 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
NFKB1P19838 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NFKB1P19838 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
NFKB1P19838 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NFKB1P19838 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
NFKB1P19838 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
NFKB1P19838 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
NFKB1P19838 GALNS-213ENST00000569433 723 ntTSL 3 BASIC21.18■□□□□ 0.98
NFKB1P19838 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC21.18■□□□□ 0.98
NFKB1P19838 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
NFKB1P19838 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NFKB1P19838 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NFKB1P19838 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NFKB1P19838 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC21.18■□□□□ 0.98
NFKB1P19838 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
NFKB1P19838 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NFKB1P19838 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
NFKB1P19838 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
NFKB1P19838 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
NFKB1P19838 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
NFKB1P19838 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NFKB1P19838 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
NFKB1P19838 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC21.17■□□□□ 0.98
NFKB1P19838 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
NFKB1P19838 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC21.17■□□□□ 0.98
NFKB1P19838 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
NFKB1P19838 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
NFKB1P19838 KRT16P2-201ENST00000414673 1423 ntBASIC21.17■□□□□ 0.98
NFKB1P19838 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
NFKB1P19838 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
NFKB1P19838 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
NFKB1P19838 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
NFKB1P19838 PLK5-205ENST00000642079 1969 ntBASIC21.17■□□□□ 0.98
NFKB1P19838 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NFKB1P19838 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NFKB1P19838 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
NFKB1P19838 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
NFKB1P19838 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
NFKB1P19838 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NFKB1P19838 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
NFKB1P19838 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC21.16■□□□□ 0.98
NFKB1P19838 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NFKB1P19838 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
NFKB1P19838 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
NFKB1P19838 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NFKB1P19838 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
NFKB1P19838 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
NFKB1P19838 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
NFKB1P19838 AC034268.1-201ENST00000441047 882 ntBASIC21.16■□□□□ 0.98
NFKB1P19838 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC21.16■□□□□ 0.98
NFKB1P19838 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC21.16■□□□□ 0.98
NFKB1P19838 AC120498.10-201ENST00000621827 505 ntBASIC21.16■□□□□ 0.98
NFKB1P19838 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
NFKB1P19838 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
NFKB1P19838 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NFKB1P19838 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
NFKB1P19838 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC21.15■□□□□ 0.98
NFKB1P19838 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
NFKB1P19838 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC21.15■□□□□ 0.98
NFKB1P19838 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC21.15■□□□□ 0.98
NFKB1P19838 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
NFKB1P19838 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
NFKB1P19838 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NFKB1P19838 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.15■□□□□ 0.98
NFKB1P19838 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NFKB1P19838 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NFKB1P19838 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
NFKB1P19838 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
NFKB1P19838 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC21.15■□□□□ 0.98
NFKB1P19838 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC21.15■□□□□ 0.98
NFKB1P19838 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
NFKB1P19838 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC21.14■□□□□ 0.98
NFKB1P19838 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
NFKB1P19838 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC21.14■□□□□ 0.98
NFKB1P19838 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.97
NFKB1P19838 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
NFKB1P19838 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NFKB1P19838 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC21.14■□□□□ 0.97
NFKB1P19838 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
NFKB1P19838 RARRES2P11-201ENST00000635158 484 ntBASIC21.14■□□□□ 0.97
NFKB1P19838 AC121338.2-201ENST00000622535 1744 ntBASIC21.14■□□□□ 0.97
NFKB1P19838 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
NFKB1P19838 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms