Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC18.24■□□□□ 0.51
UBCP0CG48 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.24■□□□□ 0.51
UBCP0CG48 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
UBCP0CG48 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
UBCP0CG48 AC055733.4-201ENST00000638462 1354 ntBASIC18.24■□□□□ 0.51
UBCP0CG48 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC18.24■□□□□ 0.51
UBCP0CG48 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.24■□□□□ 0.51
UBCP0CG48 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
UBCP0CG48 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
UBCP0CG48 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.24■□□□□ 0.51
UBCP0CG48 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.24■□□□□ 0.51
UBCP0CG48 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC18.23■□□□□ 0.51
UBCP0CG48 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
UBCP0CG48 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
UBCP0CG48 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
UBCP0CG48 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
UBCP0CG48 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
UBCP0CG48 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
UBCP0CG48 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
UBCP0CG48 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
UBCP0CG48 LHPP-203ENST00000392757 840 ntTSL 3 BASIC18.23■□□□□ 0.51
UBCP0CG48 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
UBCP0CG48 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
UBCP0CG48 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
UBCP0CG48 MPST-208ENST00000628507 698 ntTSL 5 BASIC18.23■□□□□ 0.51
UBCP0CG48 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
UBCP0CG48 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
UBCP0CG48 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.23■□□□□ 0.51
UBCP0CG48 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
UBCP0CG48 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
UBCP0CG48 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
UBCP0CG48 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.22■□□□□ 0.51
UBCP0CG48 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
UBCP0CG48 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
UBCP0CG48 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
UBCP0CG48 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
UBCP0CG48 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
UBCP0CG48 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
UBCP0CG48 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
UBCP0CG48 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
UBCP0CG48 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
UBCP0CG48 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
UBCP0CG48 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
UBCP0CG48 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
UBCP0CG48 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC18.22■□□□□ 0.51
UBCP0CG48 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC18.22■□□□□ 0.51
UBCP0CG48 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC18.22■□□□□ 0.51
UBCP0CG48 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
UBCP0CG48 AC105233.4-201ENST00000642045 216 ntBASIC18.22■□□□□ 0.51
UBCP0CG48 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
UBCP0CG48 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
UBCP0CG48 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
UBCP0CG48 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
UBCP0CG48 RARG-204ENST00000543726 1779 ntTSL 2 BASIC18.22■□□□□ 0.51
UBCP0CG48 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.22■□□□□ 0.51
UBCP0CG48 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
UBCP0CG48 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
UBCP0CG48 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
UBCP0CG48 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.22■□□□□ 0.51
UBCP0CG48 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
UBCP0CG48 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
UBCP0CG48 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.21■□□□□ 0.51
UBCP0CG48 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
UBCP0CG48 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
UBCP0CG48 MFF-208ENST00000409616 1247 ntTSL 5 BASIC18.21■□□□□ 0.51
UBCP0CG48 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC18.21■□□□□ 0.51
UBCP0CG48 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC18.21■□□□□ 0.51
UBCP0CG48 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC18.21■□□□□ 0.51
UBCP0CG48 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC18.21■□□□□ 0.51
UBCP0CG48 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
UBCP0CG48 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
UBCP0CG48 AC005224.4-201ENST00000583262 1652 ntBASIC18.21■□□□□ 0.51
UBCP0CG48 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
UBCP0CG48 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
UBCP0CG48 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.21■□□□□ 0.51
UBCP0CG48 PLK5-205ENST00000642079 1969 ntBASIC18.21■□□□□ 0.5
UBCP0CG48 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
UBCP0CG48 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.2■□□□□ 0.5
UBCP0CG48 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
UBCP0CG48 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
UBCP0CG48 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
UBCP0CG48 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
UBCP0CG48 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
UBCP0CG48 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
UBCP0CG48 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
UBCP0CG48 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
UBCP0CG48 AC027682.1-201ENST00000562846 899 ntBASIC18.2■□□□□ 0.5
UBCP0CG48 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
UBCP0CG48 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
UBCP0CG48 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
UBCP0CG48 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
UBCP0CG48 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.2■□□□□ 0.5
UBCP0CG48 AC121338.2-201ENST00000622535 1744 ntBASIC18.2■□□□□ 0.5
UBCP0CG48 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
UBCP0CG48 GABARAPL3-202ENST00000624044 1851 ntBASIC18.2■□□□□ 0.5
UBCP0CG48 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC18.2■□□□□ 0.5
UBCP0CG48 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.2■□□□□ 0.5
UBCP0CG48 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
UBCP0CG48 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
UBCP0CG48 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms