Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.47■□□□□ 0.87
CAPN1P07384 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.47■□□□□ 0.87
CAPN1P07384 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.47■□□□□ 0.87
CAPN1P07384 GALNS-213ENST00000569433 723 ntTSL 3 BASIC20.47■□□□□ 0.87
CAPN1P07384 VPS53-216ENST00000574029 585 ntTSL 4 BASIC20.47■□□□□ 0.87
CAPN1P07384 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.47■□□□□ 0.87
CAPN1P07384 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
CAPN1P07384 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CAPN1P07384 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CAPN1P07384 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.47■□□□□ 0.87
CAPN1P07384 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.46■□□□□ 0.87
CAPN1P07384 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
CAPN1P07384 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CAPN1P07384 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CAPN1P07384 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CAPN1P07384 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CAPN1P07384 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CAPN1P07384 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CAPN1P07384 AC004854.2-201ENST00000608450 1441 ntBASIC20.46■□□□□ 0.87
CAPN1P07384 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CAPN1P07384 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CAPN1P07384 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CAPN1P07384 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
CAPN1P07384 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
CAPN1P07384 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC20.46■□□□□ 0.87
CAPN1P07384 COX20-201ENST00000366528 568 ntTSL 2 BASIC20.46■□□□□ 0.87
CAPN1P07384 AC006015.1-201ENST00000429970 570 ntBASIC20.46■□□□□ 0.87
CAPN1P07384 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.46■□□□□ 0.87
CAPN1P07384 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.46■□□□□ 0.87
CAPN1P07384 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CAPN1P07384 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
CAPN1P07384 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
CAPN1P07384 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CAPN1P07384 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CAPN1P07384 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CAPN1P07384 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CAPN1P07384 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CAPN1P07384 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CAPN1P07384 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CAPN1P07384 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CAPN1P07384 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.45■□□□□ 0.86
CAPN1P07384 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CAPN1P07384 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.45■□□□□ 0.86
CAPN1P07384 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
CAPN1P07384 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.45■□□□□ 0.86
CAPN1P07384 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CAPN1P07384 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC20.45■□□□□ 0.86
CAPN1P07384 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC20.45■□□□□ 0.86
CAPN1P07384 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.45■□□□□ 0.86
CAPN1P07384 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.45■□□□□ 0.86
CAPN1P07384 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.45■□□□□ 0.86
CAPN1P07384 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
CAPN1P07384 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.45■□□□□ 0.86
CAPN1P07384 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
CAPN1P07384 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CAPN1P07384 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CAPN1P07384 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CAPN1P07384 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CAPN1P07384 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
CAPN1P07384 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CAPN1P07384 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CAPN1P07384 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.44■□□□□ 0.86
CAPN1P07384 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
CAPN1P07384 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CAPN1P07384 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CAPN1P07384 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CAPN1P07384 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
CAPN1P07384 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC20.44■□□□□ 0.86
CAPN1P07384 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CAPN1P07384 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.44■□□□□ 0.86
CAPN1P07384 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CAPN1P07384 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CAPN1P07384 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.44■□□□□ 0.86
CAPN1P07384 AL049796.1-201ENST00000565336 1766 ntBASIC20.44■□□□□ 0.86
CAPN1P07384 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
CAPN1P07384 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.43■□□□□ 0.86
CAPN1P07384 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CAPN1P07384 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CAPN1P07384 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CAPN1P07384 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CAPN1P07384 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CAPN1P07384 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.43■□□□□ 0.86
CAPN1P07384 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
CAPN1P07384 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CAPN1P07384 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
CAPN1P07384 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CAPN1P07384 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.43■□□□□ 0.86
CAPN1P07384 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CAPN1P07384 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CAPN1P07384 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.43■□□□□ 0.86
CAPN1P07384 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
CAPN1P07384 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.42■□□□□ 0.86
CAPN1P07384 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CAPN1P07384 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CAPN1P07384 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CAPN1P07384 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CAPN1P07384 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20.42■□□□□ 0.86
CAPN1P07384 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC20.42■□□□□ 0.86
CAPN1P07384 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.42■□□□□ 0.86
CAPN1P07384 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms