Protein–RNA interactions for Protein: P02656

APOC3, Apolipoprotein C-III, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3P02656 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC16.83■□□□□ 0.28
APOC3P02656 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
APOC3P02656 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
APOC3P02656 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
APOC3P02656 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
APOC3P02656 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
APOC3P02656 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
APOC3P02656 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
APOC3P02656 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
APOC3P02656 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
APOC3P02656 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
APOC3P02656 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
APOC3P02656 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC16.82■□□□□ 0.28
APOC3P02656 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
APOC3P02656 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
APOC3P02656 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
APOC3P02656 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
APOC3P02656 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC16.82■□□□□ 0.28
APOC3P02656 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
APOC3P02656 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
APOC3P02656 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
APOC3P02656 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
APOC3P02656 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
APOC3P02656 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
APOC3P02656 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
APOC3P02656 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC16.82■□□□□ 0.28
APOC3P02656 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
APOC3P02656 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
APOC3P02656 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
APOC3P02656 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC16.82■□□□□ 0.28
APOC3P02656 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
APOC3P02656 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
APOC3P02656 BCL2-203ENST00000589955 5011 ntBASIC16.81■□□□□ 0.28
APOC3P02656 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC16.81■□□□□ 0.28
APOC3P02656 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC16.81■□□□□ 0.28
APOC3P02656 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC16.81■□□□□ 0.28
APOC3P02656 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
APOC3P02656 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC16.81■□□□□ 0.28
APOC3P02656 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
APOC3P02656 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
APOC3P02656 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
APOC3P02656 AC106820.2-201ENST00000563775 3264 ntBASIC16.81■□□□□ 0.28
APOC3P02656 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
APOC3P02656 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
APOC3P02656 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
APOC3P02656 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
APOC3P02656 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
APOC3P02656 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC16.81■□□□□ 0.28
APOC3P02656 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC16.81■□□□□ 0.28
APOC3P02656 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
APOC3P02656 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
APOC3P02656 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
APOC3P02656 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC16.81■□□□□ 0.28
APOC3P02656 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
APOC3P02656 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
APOC3P02656 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
APOC3P02656 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
APOC3P02656 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.8■□□□□ 0.28
APOC3P02656 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC16.8■□□□□ 0.28
APOC3P02656 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
APOC3P02656 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC16.8■□□□□ 0.28
APOC3P02656 DYM-203ENST00000442713 2147 ntTSL 2 BASIC16.8■□□□□ 0.28
APOC3P02656 AC148477.6-201ENST00000623746 465 ntBASIC16.8■□□□□ 0.28
APOC3P02656 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
APOC3P02656 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
APOC3P02656 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
APOC3P02656 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
APOC3P02656 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
APOC3P02656 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
APOC3P02656 LINC01960-201ENST00000563759 1884 ntBASIC16.8■□□□□ 0.28
APOC3P02656 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
APOC3P02656 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
APOC3P02656 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
APOC3P02656 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
APOC3P02656 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
APOC3P02656 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC16.79■□□□□ 0.28
APOC3P02656 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
APOC3P02656 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.79■□□□□ 0.28
APOC3P02656 AL049812.1-201ENST00000432563 2267 ntBASIC16.79■□□□□ 0.28
APOC3P02656 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
APOC3P02656 CIB2-204ENST00000557846 934 ntTSL 3 BASIC16.79■□□□□ 0.28
APOC3P02656 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
APOC3P02656 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
APOC3P02656 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
APOC3P02656 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
APOC3P02656 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
APOC3P02656 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
APOC3P02656 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
APOC3P02656 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
APOC3P02656 ADK-206ENST00000541550 2222 ntTSL 2 BASIC16.78■□□□□ 0.28
APOC3P02656 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC16.78■□□□□ 0.28
APOC3P02656 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC16.78■□□□□ 0.28
APOC3P02656 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC16.78■□□□□ 0.28
APOC3P02656 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
APOC3P02656 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
APOC3P02656 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
APOC3P02656 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
APOC3P02656 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC16.78■□□□□ 0.28
APOC3P02656 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.78■□□□□ 0.28
APOC3P02656 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms