Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
CLPTM1O96005 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLPTM1O96005 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLPTM1O96005 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLPTM1O96005 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLPTM1O96005 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.6■□□□□ 0.73
CLPTM1O96005 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.6■□□□□ 0.73
CLPTM1O96005 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLPTM1O96005 AC026471.1-201ENST00000564629 3026 ntBASIC19.6■□□□□ 0.73
CLPTM1O96005 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
CLPTM1O96005 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CLPTM1O96005 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC19.59■□□□□ 0.73
CLPTM1O96005 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CLPTM1O96005 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLPTM1O96005 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CLPTM1O96005 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLPTM1O96005 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLPTM1O96005 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC19.59■□□□□ 0.73
CLPTM1O96005 CA15P2-201ENST00000611168 834 ntBASIC19.59■□□□□ 0.73
CLPTM1O96005 AL117332.1-201ENST00000622628 974 ntBASIC19.59■□□□□ 0.73
CLPTM1O96005 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLPTM1O96005 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLPTM1O96005 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLPTM1O96005 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLPTM1O96005 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
CLPTM1O96005 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
CLPTM1O96005 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.59■□□□□ 0.73
CLPTM1O96005 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLPTM1O96005 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLPTM1O96005 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLPTM1O96005 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CLPTM1O96005 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
CLPTM1O96005 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CLPTM1O96005 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.58■□□□□ 0.73
CLPTM1O96005 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.58■□□□□ 0.73
CLPTM1O96005 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
CLPTM1O96005 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
CLPTM1O96005 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
CLPTM1O96005 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
CLPTM1O96005 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC19.58■□□□□ 0.72
CLPTM1O96005 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.58■□□□□ 0.72
CLPTM1O96005 AK3-203ENST00000447596 705 ntTSL 2 BASIC19.58■□□□□ 0.72
CLPTM1O96005 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLPTM1O96005 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLPTM1O96005 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLPTM1O96005 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLPTM1O96005 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLPTM1O96005 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLPTM1O96005 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
CLPTM1O96005 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.58■□□□□ 0.72
CLPTM1O96005 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
CLPTM1O96005 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLPTM1O96005 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
CLPTM1O96005 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
CLPTM1O96005 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLPTM1O96005 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLPTM1O96005 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC19.57■□□□□ 0.72
CLPTM1O96005 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLPTM1O96005 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
CLPTM1O96005 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLPTM1O96005 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CLPTM1O96005 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLPTM1O96005 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC19.57■□□□□ 0.72
CLPTM1O96005 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC19.57■□□□□ 0.72
CLPTM1O96005 AC104564.3-201ENST00000582367 638 ntBASIC19.57■□□□□ 0.72
CLPTM1O96005 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC19.57■□□□□ 0.72
CLPTM1O96005 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLPTM1O96005 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLPTM1O96005 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.57■□□□□ 0.72
CLPTM1O96005 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CLPTM1O96005 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.57■□□□□ 0.72
CLPTM1O96005 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
CLPTM1O96005 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC19.57■□□□□ 0.72
CLPTM1O96005 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CLPTM1O96005 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLPTM1O96005 AC005703.6-201ENST00000623265 1329 ntBASIC19.56■□□□□ 0.72
CLPTM1O96005 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CLPTM1O96005 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLPTM1O96005 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLPTM1O96005 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLPTM1O96005 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CLPTM1O96005 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC19.56■□□□□ 0.72
CLPTM1O96005 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
CLPTM1O96005 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
CLPTM1O96005 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.56■□□□□ 0.72
CLPTM1O96005 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLPTM1O96005 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.56■□□□□ 0.72
CLPTM1O96005 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.56■□□□□ 0.72
CLPTM1O96005 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CLPTM1O96005 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CLPTM1O96005 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
CLPTM1O96005 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CLPTM1O96005 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CLPTM1O96005 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.55■□□□□ 0.72
CLPTM1O96005 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CLPTM1O96005 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CLPTM1O96005 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
CLPTM1O96005 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
CLPTM1O96005 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CLPTM1O96005 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms