Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLPXO76031 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
CLPXO76031 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
CLPXO76031 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
CLPXO76031 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLPXO76031 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.87■□□□□ 0.61
CLPXO76031 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CLPXO76031 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLPXO76031 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLPXO76031 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC18.87■□□□□ 0.61
CLPXO76031 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC18.87■□□□□ 0.61
CLPXO76031 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC18.87■□□□□ 0.61
CLPXO76031 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
CLPXO76031 MIR4787-201ENST00000607364 84 ntBASIC18.87■□□□□ 0.61
CLPXO76031 AC021242.3-201ENST00000607598 1377 ntBASIC18.87■□□□□ 0.61
CLPXO76031 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLPXO76031 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLPXO76031 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLPXO76031 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CLPXO76031 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLPXO76031 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLPXO76031 AC026471.6-201ENST00000622954 1905 ntBASIC18.86■□□□□ 0.61
CLPXO76031 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CLPXO76031 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.86■□□□□ 0.61
CLPXO76031 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CLPXO76031 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLPXO76031 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLPXO76031 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CLPXO76031 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC18.86■□□□□ 0.61
CLPXO76031 TK2-202ENST00000417693 1046 ntTSL 2 BASIC18.86■□□□□ 0.61
CLPXO76031 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.86■□□□□ 0.61
CLPXO76031 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLPXO76031 TNXA-203ENST00000507684 2038 ntBASIC18.86■□□□□ 0.61
CLPXO76031 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLPXO76031 AC112907.3-201ENST00000577781 2400 ntBASIC18.85■□□□□ 0.61
CLPXO76031 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.85■□□□□ 0.61
CLPXO76031 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.85■□□□□ 0.61
CLPXO76031 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
CLPXO76031 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.85■□□□□ 0.61
CLPXO76031 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLPXO76031 AC116562.4-201ENST00000641316 2276 ntBASIC18.85■□□□□ 0.61
CLPXO76031 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.85■□□□□ 0.61
CLPXO76031 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLPXO76031 AC008406.3-201ENST00000620001 1374 ntBASIC18.85■□□□□ 0.61
CLPXO76031 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLPXO76031 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLPXO76031 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLPXO76031 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLPXO76031 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CLPXO76031 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC18.85■□□□□ 0.61
CLPXO76031 AC004448.1-201ENST00000458332 883 ntBASIC18.85■□□□□ 0.61
CLPXO76031 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC18.85■□□□□ 0.61
CLPXO76031 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC18.85■□□□□ 0.61
CLPXO76031 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
CLPXO76031 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLPXO76031 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLPXO76031 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CLPXO76031 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLPXO76031 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLPXO76031 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.84■□□□□ 0.61
CLPXO76031 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.84■□□□□ 0.61
CLPXO76031 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CLPXO76031 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CLPXO76031 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.84■□□□□ 0.61
CLPXO76031 SENP5-202ENST00000419026 973 ntTSL 3 BASIC18.84■□□□□ 0.61
CLPXO76031 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC18.84■□□□□ 0.61
CLPXO76031 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC18.84■□□□□ 0.61
CLPXO76031 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC18.84■□□□□ 0.61
CLPXO76031 AP000974.1-201ENST00000623909 2387 ntBASIC18.84■□□□□ 0.61
CLPXO76031 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLPXO76031 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CLPXO76031 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
CLPXO76031 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CLPXO76031 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CLPXO76031 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CLPXO76031 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC18.83■□□□□ 0.61
CLPXO76031 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.83■□□□□ 0.61
CLPXO76031 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CLPXO76031 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
CLPXO76031 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
CLPXO76031 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
CLPXO76031 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLPXO76031 SNX5-217ENST00000606557 1087 ntBASIC18.83■□□□□ 0.6
CLPXO76031 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLPXO76031 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLPXO76031 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CLPXO76031 AC004408.2-201ENST00000623613 2777 ntBASIC18.83■□□□□ 0.6
CLPXO76031 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLPXO76031 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
CLPXO76031 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLPXO76031 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC18.83■□□□□ 0.6
CLPXO76031 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CLPXO76031 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC18.83■□□□□ 0.6
CLPXO76031 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.83■□□□□ 0.6
CLPXO76031 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLPXO76031 LINC01529-204ENST00000636474 1715 ntBASIC18.83■□□□□ 0.6
CLPXO76031 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.82■□□□□ 0.6
CLPXO76031 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLPXO76031 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC18.82■□□□□ 0.6
CLPXO76031 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms