Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 RARRES2P11-201ENST00000635158 484 ntBASIC20.91■□□□□ 0.94
RFPL1O75677 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.91■□□□□ 0.94
RFPL1O75677 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RFPL1O75677 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RFPL1O75677 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
RFPL1O75677 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RFPL1O75677 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.9■□□□□ 0.94
RFPL1O75677 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.9■□□□□ 0.94
RFPL1O75677 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.9■□□□□ 0.94
RFPL1O75677 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RFPL1O75677 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.9■□□□□ 0.94
RFPL1O75677 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RFPL1O75677 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
RFPL1O75677 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RFPL1O75677 AC090192.1-201ENST00000517740 490 ntBASIC20.9■□□□□ 0.94
RFPL1O75677 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC20.9■□□□□ 0.94
RFPL1O75677 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.9■□□□□ 0.94
RFPL1O75677 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.9■□□□□ 0.94
RFPL1O75677 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.9■□□□□ 0.94
RFPL1O75677 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RFPL1O75677 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.9■□□□□ 0.94
RFPL1O75677 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RFPL1O75677 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
RFPL1O75677 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RFPL1O75677 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
RFPL1O75677 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
RFPL1O75677 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.9■□□□□ 0.94
RFPL1O75677 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.9■□□□□ 0.94
RFPL1O75677 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RFPL1O75677 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
RFPL1O75677 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
RFPL1O75677 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.89■□□□□ 0.93
RFPL1O75677 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.89■□□□□ 0.93
RFPL1O75677 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RFPL1O75677 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RFPL1O75677 AC022517.1-201ENST00000592429 346 ntBASIC20.89■□□□□ 0.93
RFPL1O75677 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RFPL1O75677 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RFPL1O75677 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RFPL1O75677 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
RFPL1O75677 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.89■□□□□ 0.93
RFPL1O75677 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RFPL1O75677 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RFPL1O75677 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
RFPL1O75677 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
RFPL1O75677 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RFPL1O75677 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
RFPL1O75677 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RFPL1O75677 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RFPL1O75677 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RFPL1O75677 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.88■□□□□ 0.93
RFPL1O75677 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.88■□□□□ 0.93
RFPL1O75677 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC20.88■□□□□ 0.93
RFPL1O75677 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC20.88■□□□□ 0.93
RFPL1O75677 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RFPL1O75677 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RFPL1O75677 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RFPL1O75677 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RFPL1O75677 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
RFPL1O75677 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RFPL1O75677 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
RFPL1O75677 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.87■□□□□ 0.93
RFPL1O75677 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RFPL1O75677 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.87■□□□□ 0.93
RFPL1O75677 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.87■□□□□ 0.93
RFPL1O75677 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
RFPL1O75677 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RFPL1O75677 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
RFPL1O75677 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.87■□□□□ 0.93
RFPL1O75677 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RFPL1O75677 KRT18P5-201ENST00000436075 1291 ntBASIC20.87■□□□□ 0.93
RFPL1O75677 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC20.87■□□□□ 0.93
RFPL1O75677 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.87■□□□□ 0.93
RFPL1O75677 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.87■□□□□ 0.93
RFPL1O75677 IKBKGP1-201ENST00000612193 1073 ntBASIC20.87■□□□□ 0.93
RFPL1O75677 AL358852.1-201ENST00000623174 1268 ntBASIC20.87■□□□□ 0.93
RFPL1O75677 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RFPL1O75677 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
RFPL1O75677 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RFPL1O75677 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.87■□□□□ 0.93
RFPL1O75677 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.87■□□□□ 0.93
RFPL1O75677 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RFPL1O75677 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RFPL1O75677 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RFPL1O75677 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RFPL1O75677 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RFPL1O75677 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.86■□□□□ 0.93
RFPL1O75677 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
RFPL1O75677 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
RFPL1O75677 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RFPL1O75677 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.86■□□□□ 0.93
RFPL1O75677 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RFPL1O75677 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RFPL1O75677 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
RFPL1O75677 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
RFPL1O75677 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.86■□□□□ 0.93
RFPL1O75677 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC20.86■□□□□ 0.93
RFPL1O75677 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RFPL1O75677 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RFPL1O75677 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms