Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
OPHN1O60890 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC21.68■■□□□ 1.06
OPHN1O60890 TMEM191A-211ENST00000637163 1067 ntBASIC21.68■■□□□ 1.06
OPHN1O60890 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
OPHN1O60890 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC21.68■■□□□ 1.06
OPHN1O60890 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC21.68■■□□□ 1.06
OPHN1O60890 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
OPHN1O60890 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
OPHN1O60890 FEM1AP4-201ENST00000443167 1987 ntBASIC21.68■■□□□ 1.06
OPHN1O60890 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.68■■□□□ 1.06
OPHN1O60890 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
OPHN1O60890 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
OPHN1O60890 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
OPHN1O60890 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
OPHN1O60890 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
OPHN1O60890 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
OPHN1O60890 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
OPHN1O60890 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC21.67■■□□□ 1.06
OPHN1O60890 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21.67■■□□□ 1.06
OPHN1O60890 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC21.67■■□□□ 1.06
OPHN1O60890 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
OPHN1O60890 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
OPHN1O60890 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
OPHN1O60890 CROCCP5-201ENST00000436658 830 ntBASIC21.67■■□□□ 1.06
OPHN1O60890 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
OPHN1O60890 WWOX-218ENST00000627394 894 ntTSL 5 BASIC21.67■■□□□ 1.06
OPHN1O60890 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
OPHN1O60890 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
OPHN1O60890 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
OPHN1O60890 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
OPHN1O60890 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
OPHN1O60890 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC21.67■■□□□ 1.06
OPHN1O60890 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
OPHN1O60890 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
OPHN1O60890 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
OPHN1O60890 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.66■■□□□ 1.06
OPHN1O60890 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
OPHN1O60890 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
OPHN1O60890 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
OPHN1O60890 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
OPHN1O60890 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC21.66■■□□□ 1.06
OPHN1O60890 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC21.66■■□□□ 1.06
OPHN1O60890 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
OPHN1O60890 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
OPHN1O60890 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
OPHN1O60890 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
OPHN1O60890 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
OPHN1O60890 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.65■■□□□ 1.06
OPHN1O60890 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
OPHN1O60890 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
OPHN1O60890 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
OPHN1O60890 KRT18P11-201ENST00000435214 1283 ntBASIC21.65■■□□□ 1.06
OPHN1O60890 NCF1B-203ENST00000435988 1254 ntBASIC21.65■■□□□ 1.06
OPHN1O60890 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC21.65■■□□□ 1.06
OPHN1O60890 PXK-203ENST00000383715 1756 ntTSL 5 BASIC21.65■■□□□ 1.06
OPHN1O60890 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
OPHN1O60890 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
OPHN1O60890 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
OPHN1O60890 AC005229.4-201ENST00000610085 2198 ntBASIC21.65■■□□□ 1.06
OPHN1O60890 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC21.65■■□□□ 1.06
OPHN1O60890 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
OPHN1O60890 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
OPHN1O60890 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
OPHN1O60890 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
OPHN1O60890 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
OPHN1O60890 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
OPHN1O60890 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC21.64■■□□□ 1.06
OPHN1O60890 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC21.64■■□□□ 1.06
OPHN1O60890 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
OPHN1O60890 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
OPHN1O60890 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC21.64■■□□□ 1.05
OPHN1O60890 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC21.64■■□□□ 1.05
OPHN1O60890 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
OPHN1O60890 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
OPHN1O60890 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC21.64■■□□□ 1.05
OPHN1O60890 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
OPHN1O60890 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
OPHN1O60890 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC21.64■■□□□ 1.05
OPHN1O60890 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
OPHN1O60890 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
OPHN1O60890 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
OPHN1O60890 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
OPHN1O60890 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
OPHN1O60890 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC21.64■■□□□ 1.05
OPHN1O60890 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC21.64■■□□□ 1.05
OPHN1O60890 AC055733.4-201ENST00000638462 1354 ntBASIC21.63■■□□□ 1.05
OPHN1O60890 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
OPHN1O60890 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
OPHN1O60890 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
OPHN1O60890 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
OPHN1O60890 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC21.63■■□□□ 1.05
OPHN1O60890 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC21.63■■□□□ 1.05
OPHN1O60890 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC21.63■■□□□ 1.05
OPHN1O60890 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.63■■□□□ 1.05
OPHN1O60890 BX005040.4-201ENST00000637145 1518 ntBASIC21.63■■□□□ 1.05
OPHN1O60890 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC21.63■■□□□ 1.05
OPHN1O60890 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
OPHN1O60890 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
OPHN1O60890 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC21.62■■□□□ 1.05
OPHN1O60890 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms