Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC21.23■□□□□ 0.99
KDELR3O43731 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
KDELR3O43731 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC21.23■□□□□ 0.99
KDELR3O43731 MAZ-216ENST00000616501 991 ntTSL 5 BASIC21.23■□□□□ 0.99
KDELR3O43731 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC21.23■□□□□ 0.99
KDELR3O43731 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
KDELR3O43731 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
KDELR3O43731 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
KDELR3O43731 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
KDELR3O43731 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
KDELR3O43731 AC091799.1-201ENST00000422823 811 ntBASIC21.22■□□□□ 0.99
KDELR3O43731 AC090192.1-201ENST00000517740 490 ntBASIC21.22■□□□□ 0.99
KDELR3O43731 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
KDELR3O43731 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
KDELR3O43731 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC21.22■□□□□ 0.99
KDELR3O43731 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
KDELR3O43731 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
KDELR3O43731 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
KDELR3O43731 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
KDELR3O43731 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
KDELR3O43731 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
KDELR3O43731 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
KDELR3O43731 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC21.21■□□□□ 0.99
KDELR3O43731 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
KDELR3O43731 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
KDELR3O43731 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
KDELR3O43731 AL024507.2-201ENST00000606070 2574 ntBASIC21.21■□□□□ 0.99
KDELR3O43731 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC21.21■□□□□ 0.99
KDELR3O43731 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.21■□□□□ 0.99
KDELR3O43731 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
KDELR3O43731 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC21.21■□□□□ 0.99
KDELR3O43731 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC21.21■□□□□ 0.99
KDELR3O43731 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.21■□□□□ 0.99
KDELR3O43731 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
KDELR3O43731 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
KDELR3O43731 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
KDELR3O43731 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
KDELR3O43731 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
KDELR3O43731 FEM1AP4-201ENST00000443167 1987 ntBASIC21.21■□□□□ 0.99
KDELR3O43731 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
KDELR3O43731 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
KDELR3O43731 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.99
KDELR3O43731 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
KDELR3O43731 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
KDELR3O43731 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
KDELR3O43731 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
KDELR3O43731 PLLP-204ENST00000569059 665 ntTSL 3 BASIC21.2■□□□□ 0.98
KDELR3O43731 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
KDELR3O43731 AC026310.3-201ENST00000625186 2373 ntBASIC21.2■□□□□ 0.98
KDELR3O43731 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
KDELR3O43731 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC21.2■□□□□ 0.98
KDELR3O43731 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC21.2■□□□□ 0.98
KDELR3O43731 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
KDELR3O43731 AC068338.2-201ENST00000563278 1430 ntBASIC21.2■□□□□ 0.98
KDELR3O43731 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
KDELR3O43731 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
KDELR3O43731 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC21.2■□□□□ 0.98
KDELR3O43731 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC21.2■□□□□ 0.98
KDELR3O43731 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
KDELR3O43731 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
KDELR3O43731 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
KDELR3O43731 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
KDELR3O43731 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
KDELR3O43731 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC21.19■□□□□ 0.98
KDELR3O43731 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC21.19■□□□□ 0.98
KDELR3O43731 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
KDELR3O43731 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC21.19■□□□□ 0.98
KDELR3O43731 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
KDELR3O43731 CROCCP5-201ENST00000436658 830 ntBASIC21.19■□□□□ 0.98
KDELR3O43731 AL591742.1-201ENST00000604433 565 ntBASIC21.19■□□□□ 0.98
KDELR3O43731 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC21.19■□□□□ 0.98
KDELR3O43731 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
KDELR3O43731 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
KDELR3O43731 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
KDELR3O43731 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
KDELR3O43731 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
KDELR3O43731 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
KDELR3O43731 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
KDELR3O43731 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC21.18■□□□□ 0.98
KDELR3O43731 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC21.18■□□□□ 0.98
KDELR3O43731 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC21.18■□□□□ 0.98
KDELR3O43731 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC21.18■□□□□ 0.98
KDELR3O43731 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
KDELR3O43731 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
KDELR3O43731 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
KDELR3O43731 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
KDELR3O43731 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
KDELR3O43731 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
KDELR3O43731 AL049796.1-201ENST00000565336 1766 ntBASIC21.18■□□□□ 0.98
KDELR3O43731 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
KDELR3O43731 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
KDELR3O43731 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
KDELR3O43731 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC21.18■□□□□ 0.98
KDELR3O43731 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
KDELR3O43731 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.17■□□□□ 0.98
KDELR3O43731 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.17■□□□□ 0.98
KDELR3O43731 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
KDELR3O43731 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
KDELR3O43731 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC21.17■□□□□ 0.98
KDELR3O43731 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms