Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
SGCEO43556 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SGCEO43556 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.37■□□□□ 0.53
SGCEO43556 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
SGCEO43556 PALM-208ENST00000592155 2272 ntTSL 4 BASIC18.37■□□□□ 0.53
SGCEO43556 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
SGCEO43556 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC18.37■□□□□ 0.53
SGCEO43556 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SGCEO43556 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC18.37■□□□□ 0.53
SGCEO43556 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SGCEO43556 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.37■□□□□ 0.53
SGCEO43556 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
SGCEO43556 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
SGCEO43556 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SGCEO43556 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SGCEO43556 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SGCEO43556 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC18.37■□□□□ 0.53
SGCEO43556 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
SGCEO43556 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
SGCEO43556 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SGCEO43556 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
SGCEO43556 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SGCEO43556 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
SGCEO43556 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.36■□□□□ 0.53
SGCEO43556 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SGCEO43556 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC18.36■□□□□ 0.53
SGCEO43556 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC18.36■□□□□ 0.53
SGCEO43556 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SGCEO43556 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.36■□□□□ 0.53
SGCEO43556 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
SGCEO43556 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SGCEO43556 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
SGCEO43556 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SGCEO43556 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SGCEO43556 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.35■□□□□ 0.53
SGCEO43556 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SGCEO43556 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.35■□□□□ 0.53
SGCEO43556 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SGCEO43556 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC18.35■□□□□ 0.53
SGCEO43556 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC18.35■□□□□ 0.53
SGCEO43556 TERF1P2-201ENST00000583350 1212 ntBASIC18.35■□□□□ 0.53
SGCEO43556 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SGCEO43556 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC18.35■□□□□ 0.53
SGCEO43556 RAB43-208ENST00000615093 783 ntTSL 5 BASIC18.35■□□□□ 0.53
SGCEO43556 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SGCEO43556 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SGCEO43556 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SGCEO43556 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SGCEO43556 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SGCEO43556 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SGCEO43556 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SGCEO43556 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.34■□□□□ 0.53
SGCEO43556 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
SGCEO43556 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SGCEO43556 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC18.34■□□□□ 0.53
SGCEO43556 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC18.34■□□□□ 0.53
SGCEO43556 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC18.34■□□□□ 0.53
SGCEO43556 CCDC92B-201ENST00000575506 885 ntBASIC18.34■□□□□ 0.53
SGCEO43556 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC18.34■□□□□ 0.53
SGCEO43556 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
SGCEO43556 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.34■□□□□ 0.53
SGCEO43556 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SGCEO43556 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SGCEO43556 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SGCEO43556 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
SGCEO43556 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.33■□□□□ 0.53
SGCEO43556 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SGCEO43556 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
SGCEO43556 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SGCEO43556 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.33■□□□□ 0.53
SGCEO43556 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SGCEO43556 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC18.33■□□□□ 0.52
SGCEO43556 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SGCEO43556 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
SGCEO43556 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SGCEO43556 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC18.33■□□□□ 0.52
SGCEO43556 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
SGCEO43556 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC18.33■□□□□ 0.52
SGCEO43556 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SGCEO43556 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
SGCEO43556 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SGCEO43556 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SGCEO43556 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SGCEO43556 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SGCEO43556 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SGCEO43556 AL049796.1-201ENST00000565336 1766 ntBASIC18.32■□□□□ 0.52
SGCEO43556 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SGCEO43556 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.32■□□□□ 0.52
SGCEO43556 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SGCEO43556 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SGCEO43556 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC18.32■□□□□ 0.52
SGCEO43556 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SGCEO43556 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.32■□□□□ 0.52
SGCEO43556 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SGCEO43556 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SGCEO43556 SERP1-208ENST00000491660 830 ntTSL 2 BASIC18.32■□□□□ 0.52
SGCEO43556 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC18.32■□□□□ 0.52
SGCEO43556 KRT18P14-201ENST00000534205 1250 ntBASIC18.32■□□□□ 0.52
SGCEO43556 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC18.32■□□□□ 0.52
SGCEO43556 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms