Protein–RNA interactions for Protein: O43307

ARHGEF9, Rho guanine nucleotide exchange factor 9, humanhuman

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF9O43307 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
ARHGEF9O43307 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ARHGEF9O43307 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.2■□□□□ 0.66
ARHGEF9O43307 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.2■□□□□ 0.66
ARHGEF9O43307 AC244015.2-201ENST00000616358 1861 ntBASIC19.2■□□□□ 0.66
ARHGEF9O43307 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.2■□□□□ 0.66
ARHGEF9O43307 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
ARHGEF9O43307 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ARHGEF9O43307 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.2■□□□□ 0.66
ARHGEF9O43307 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
ARHGEF9O43307 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
ARHGEF9O43307 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
ARHGEF9O43307 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
ARHGEF9O43307 AC026310.3-201ENST00000625186 2373 ntBASIC19.2■□□□□ 0.66
ARHGEF9O43307 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ARHGEF9O43307 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.2■□□□□ 0.66
ARHGEF9O43307 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC19.2■□□□□ 0.66
ARHGEF9O43307 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ARHGEF9O43307 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ARHGEF9O43307 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
ARHGEF9O43307 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ARHGEF9O43307 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ARHGEF9O43307 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
ARHGEF9O43307 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
ARHGEF9O43307 HCG11-201ENST00000411553 5696 ntBASIC19.19■□□□□ 0.66
ARHGEF9O43307 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ARHGEF9O43307 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ARHGEF9O43307 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.19■□□□□ 0.66
ARHGEF9O43307 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
ARHGEF9O43307 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
ARHGEF9O43307 KRT18P5-201ENST00000436075 1291 ntBASIC19.19■□□□□ 0.66
ARHGEF9O43307 AP005435.1-201ENST00000529293 1178 ntBASIC19.19■□□□□ 0.66
ARHGEF9O43307 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
ARHGEF9O43307 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ARHGEF9O43307 AC026471.6-201ENST00000622954 1905 ntBASIC19.19■□□□□ 0.66
ARHGEF9O43307 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
ARHGEF9O43307 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
ARHGEF9O43307 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ARHGEF9O43307 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
ARHGEF9O43307 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.19■□□□□ 0.66
ARHGEF9O43307 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ARHGEF9O43307 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.18■□□□□ 0.66
ARHGEF9O43307 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC19.18■□□□□ 0.66
ARHGEF9O43307 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
ARHGEF9O43307 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ARHGEF9O43307 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ARHGEF9O43307 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.18■□□□□ 0.66
ARHGEF9O43307 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.18■□□□□ 0.66
ARHGEF9O43307 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ARHGEF9O43307 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
ARHGEF9O43307 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ARHGEF9O43307 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ARHGEF9O43307 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.18■□□□□ 0.66
ARHGEF9O43307 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ARHGEF9O43307 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ARHGEF9O43307 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.17■□□□□ 0.66
ARHGEF9O43307 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
ARHGEF9O43307 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.17■□□□□ 0.66
ARHGEF9O43307 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ARHGEF9O43307 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
ARHGEF9O43307 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ARHGEF9O43307 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.17■□□□□ 0.66
ARHGEF9O43307 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ARHGEF9O43307 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
ARHGEF9O43307 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ARHGEF9O43307 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
ARHGEF9O43307 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19.17■□□□□ 0.66
ARHGEF9O43307 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.17■□□□□ 0.66
ARHGEF9O43307 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC19.17■□□□□ 0.66
ARHGEF9O43307 AL358852.1-201ENST00000623174 1268 ntBASIC19.17■□□□□ 0.66
ARHGEF9O43307 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.17■□□□□ 0.66
ARHGEF9O43307 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
ARHGEF9O43307 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
ARHGEF9O43307 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
ARHGEF9O43307 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ARHGEF9O43307 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
ARHGEF9O43307 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
ARHGEF9O43307 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ARHGEF9O43307 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ARHGEF9O43307 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ARHGEF9O43307 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
ARHGEF9O43307 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ARHGEF9O43307 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ARHGEF9O43307 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
ARHGEF9O43307 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19.16■□□□□ 0.66
ARHGEF9O43307 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19.16■□□□□ 0.66
ARHGEF9O43307 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.16■□□□□ 0.66
ARHGEF9O43307 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.16■□□□□ 0.66
ARHGEF9O43307 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
ARHGEF9O43307 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
ARHGEF9O43307 AL391422.3-201ENST00000603791 2761 ntBASIC19.16■□□□□ 0.66
ARHGEF9O43307 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ARHGEF9O43307 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ARHGEF9O43307 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
ARHGEF9O43307 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
ARHGEF9O43307 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ARHGEF9O43307 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
ARHGEF9O43307 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ARHGEF9O43307 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ARHGEF9O43307 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms