Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PHGDHO43175 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.72■□□□□ 0.91
PHGDHO43175 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
PHGDHO43175 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PHGDHO43175 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PHGDHO43175 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
PHGDHO43175 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
PHGDHO43175 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.71■□□□□ 0.91
PHGDHO43175 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
PHGDHO43175 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
PHGDHO43175 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PHGDHO43175 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
PHGDHO43175 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PHGDHO43175 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.71■□□□□ 0.91
PHGDHO43175 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
PHGDHO43175 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.71■□□□□ 0.91
PHGDHO43175 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PHGDHO43175 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PHGDHO43175 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.71■□□□□ 0.91
PHGDHO43175 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.71■□□□□ 0.91
PHGDHO43175 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.71■□□□□ 0.91
PHGDHO43175 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.71■□□□□ 0.91
PHGDHO43175 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.71■□□□□ 0.91
PHGDHO43175 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.71■□□□□ 0.91
PHGDHO43175 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PHGDHO43175 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PHGDHO43175 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.71■□□□□ 0.91
PHGDHO43175 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PHGDHO43175 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PHGDHO43175 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PHGDHO43175 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
PHGDHO43175 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PHGDHO43175 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PHGDHO43175 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.7■□□□□ 0.9
PHGDHO43175 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PHGDHO43175 SUDS3P1-201ENST00000505831 966 ntBASIC20.7■□□□□ 0.9
PHGDHO43175 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.7■□□□□ 0.9
PHGDHO43175 AC012414.1-201ENST00000556676 535 ntBASIC20.7■□□□□ 0.9
PHGDHO43175 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.7■□□□□ 0.9
PHGDHO43175 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.7■□□□□ 0.9
PHGDHO43175 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PHGDHO43175 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
PHGDHO43175 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.69■□□□□ 0.9
PHGDHO43175 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PHGDHO43175 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PHGDHO43175 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PHGDHO43175 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PHGDHO43175 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PHGDHO43175 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
PHGDHO43175 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PHGDHO43175 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.69■□□□□ 0.9
PHGDHO43175 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.69■□□□□ 0.9
PHGDHO43175 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PHGDHO43175 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PHGDHO43175 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PHGDHO43175 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PHGDHO43175 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.69■□□□□ 0.9
PHGDHO43175 AC121338.2-201ENST00000622535 1744 ntBASIC20.69■□□□□ 0.9
PHGDHO43175 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.69■□□□□ 0.9
PHGDHO43175 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PHGDHO43175 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
PHGDHO43175 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PHGDHO43175 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
PHGDHO43175 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.68■□□□□ 0.9
PHGDHO43175 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PHGDHO43175 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PHGDHO43175 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
PHGDHO43175 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PHGDHO43175 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PHGDHO43175 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PHGDHO43175 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
PHGDHO43175 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PHGDHO43175 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
PHGDHO43175 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PHGDHO43175 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.68■□□□□ 0.9
PHGDHO43175 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
PHGDHO43175 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
PHGDHO43175 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.67■□□□□ 0.9
PHGDHO43175 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
PHGDHO43175 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PHGDHO43175 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
PHGDHO43175 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
PHGDHO43175 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.67■□□□□ 0.9
PHGDHO43175 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.67■□□□□ 0.9
PHGDHO43175 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.67■□□□□ 0.9
PHGDHO43175 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
PHGDHO43175 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.67■□□□□ 0.9
PHGDHO43175 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
PHGDHO43175 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PHGDHO43175 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
PHGDHO43175 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.67■□□□□ 0.9
PHGDHO43175 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PHGDHO43175 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PHGDHO43175 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.66■□□□□ 0.9
PHGDHO43175 AC073314.1-201ENST00000568729 2216 ntBASIC20.66■□□□□ 0.9
PHGDHO43175 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
PHGDHO43175 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PHGDHO43175 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PHGDHO43175 NT5C3AP1-201ENST00000394500 1012 ntBASIC20.66■□□□□ 0.9
PHGDHO43175 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms