Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SMAD9O15198 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.87■□□□□ 0.61
SMAD9O15198 MED17-221ENST00000639724 2317 ntTSL 5 BASIC18.86■□□□□ 0.61
SMAD9O15198 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC18.86■□□□□ 0.61
SMAD9O15198 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.86■□□□□ 0.61
SMAD9O15198 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SMAD9O15198 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SMAD9O15198 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SMAD9O15198 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SMAD9O15198 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
SMAD9O15198 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SMAD9O15198 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SMAD9O15198 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SMAD9O15198 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SMAD9O15198 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SMAD9O15198 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SMAD9O15198 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SMAD9O15198 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
SMAD9O15198 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SMAD9O15198 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC18.86■□□□□ 0.61
SMAD9O15198 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SMAD9O15198 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC18.86■□□□□ 0.61
SMAD9O15198 DBI-210ENST00000542275 757 ntTSL 5 BASIC18.86■□□□□ 0.61
SMAD9O15198 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC18.86■□□□□ 0.61
SMAD9O15198 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC18.86■□□□□ 0.61
SMAD9O15198 AC022517.1-201ENST00000592429 346 ntBASIC18.86■□□□□ 0.61
SMAD9O15198 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SMAD9O15198 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SMAD9O15198 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
SMAD9O15198 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.85■□□□□ 0.61
SMAD9O15198 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SMAD9O15198 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SMAD9O15198 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC18.85■□□□□ 0.61
SMAD9O15198 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
SMAD9O15198 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
SMAD9O15198 STX7-201ENST00000367937 1090 ntTSL 5 BASIC18.85■□□□□ 0.61
SMAD9O15198 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC18.85■□□□□ 0.61
SMAD9O15198 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.85■□□□□ 0.61
SMAD9O15198 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SMAD9O15198 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SMAD9O15198 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SMAD9O15198 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SMAD9O15198 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC18.85■□□□□ 0.61
SMAD9O15198 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SMAD9O15198 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SMAD9O15198 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SMAD9O15198 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SMAD9O15198 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC18.84■□□□□ 0.61
SMAD9O15198 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SMAD9O15198 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SMAD9O15198 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
SMAD9O15198 GLI3-203ENST00000437480 451 ntTSL 2 BASIC18.84■□□□□ 0.61
SMAD9O15198 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC18.84■□□□□ 0.61
SMAD9O15198 AC244015.2-201ENST00000616358 1861 ntBASIC18.84■□□□□ 0.61
SMAD9O15198 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SMAD9O15198 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
SMAD9O15198 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.83■□□□□ 0.61
SMAD9O15198 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
SMAD9O15198 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SMAD9O15198 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
SMAD9O15198 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SMAD9O15198 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SMAD9O15198 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SMAD9O15198 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SMAD9O15198 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC18.83■□□□□ 0.6
SMAD9O15198 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
SMAD9O15198 ME3-201ENST00000323418 1068 ntTSL 5 BASIC18.83■□□□□ 0.6
SMAD9O15198 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC18.83■□□□□ 0.6
SMAD9O15198 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC18.83■□□□□ 0.6
SMAD9O15198 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC18.83■□□□□ 0.6
SMAD9O15198 AC137761.2-201ENST00000561729 223 ntBASIC18.83■□□□□ 0.6
SMAD9O15198 AC145350.3-201ENST00000569033 163 ntBASIC18.83■□□□□ 0.6
SMAD9O15198 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
SMAD9O15198 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SMAD9O15198 TUB-203ENST00000534099 1759 ntTSL 2 BASIC18.83■□□□□ 0.6
SMAD9O15198 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.6
SMAD9O15198 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SMAD9O15198 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SMAD9O15198 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SMAD9O15198 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SMAD9O15198 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SMAD9O15198 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SMAD9O15198 NAA20-201ENST00000310450 920 ntTSL 2 BASIC18.82■□□□□ 0.6
SMAD9O15198 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SMAD9O15198 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.82■□□□□ 0.6
SMAD9O15198 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC18.82■□□□□ 0.6
SMAD9O15198 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC18.82■□□□□ 0.6
SMAD9O15198 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.82■□□□□ 0.6
SMAD9O15198 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC18.82■□□□□ 0.6
SMAD9O15198 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.82■□□□□ 0.6
SMAD9O15198 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
SMAD9O15198 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
SMAD9O15198 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SMAD9O15198 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SMAD9O15198 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
SMAD9O15198 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SMAD9O15198 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
SMAD9O15198 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SMAD9O15198 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.81■□□□□ 0.6
SMAD9O15198 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 423.6 ms