Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
SOX1O00570 KRT18P68-201ENST00000392293 1000 ntBASIC22.48■■□□□ 1.19
SOX1O00570 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC22.48■■□□□ 1.19
SOX1O00570 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
SOX1O00570 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC22.48■■□□□ 1.19
SOX1O00570 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
SOX1O00570 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
SOX1O00570 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
SOX1O00570 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
SOX1O00570 LINC01568-207ENST00000641790 1380 ntBASIC22.48■■□□□ 1.19
SOX1O00570 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
SOX1O00570 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
SOX1O00570 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
SOX1O00570 AC061975.6-201ENST00000579045 1553 ntBASIC22.47■■□□□ 1.19
SOX1O00570 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
SOX1O00570 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
SOX1O00570 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
SOX1O00570 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
SOX1O00570 AC091799.1-201ENST00000422823 811 ntBASIC22.47■■□□□ 1.19
SOX1O00570 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC22.47■■□□□ 1.19
SOX1O00570 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC22.47■■□□□ 1.19
SOX1O00570 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
SOX1O00570 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC22.47■■□□□ 1.19
SOX1O00570 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC22.47■■□□□ 1.19
SOX1O00570 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC22.47■■□□□ 1.19
SOX1O00570 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC22.47■■□□□ 1.19
SOX1O00570 DECR2-212ENST00000627716 352 ntTSL 2 BASIC22.47■■□□□ 1.19
SOX1O00570 GCK-205ENST00000437084 1385 ntTSL 5 BASIC22.47■■□□□ 1.19
SOX1O00570 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC22.47■■□□□ 1.19
SOX1O00570 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
SOX1O00570 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
SOX1O00570 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC22.46■■□□□ 1.19
SOX1O00570 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC22.46■■□□□ 1.19
SOX1O00570 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
SOX1O00570 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
SOX1O00570 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
SOX1O00570 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
SOX1O00570 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
SOX1O00570 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
SOX1O00570 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC22.46■■□□□ 1.19
SOX1O00570 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
SOX1O00570 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC22.46■■□□□ 1.19
SOX1O00570 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC22.46■■□□□ 1.19
SOX1O00570 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC22.46■■□□□ 1.19
SOX1O00570 AL358472.4-201ENST00000633140 710 ntBASIC22.46■■□□□ 1.19
SOX1O00570 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC22.46■■□□□ 1.19
SOX1O00570 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
SOX1O00570 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
SOX1O00570 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC22.45■■□□□ 1.18
SOX1O00570 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
SOX1O00570 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
SOX1O00570 GGT1-206ENST00000404223 952 ntTSL 2 BASIC22.45■■□□□ 1.18
SOX1O00570 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
SOX1O00570 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC22.45■■□□□ 1.18
SOX1O00570 VPS72-207ENST00000640458 689 ntTSL 5 BASIC22.45■■□□□ 1.18
SOX1O00570 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC22.45■■□□□ 1.18
SOX1O00570 AC079598.2-202ENST00000546624 1451 ntBASIC22.45■■□□□ 1.18
SOX1O00570 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
SOX1O00570 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC22.45■■□□□ 1.18
SOX1O00570 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
SOX1O00570 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
SOX1O00570 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
SOX1O00570 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
SOX1O00570 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
SOX1O00570 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC22.44■■□□□ 1.18
SOX1O00570 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
SOX1O00570 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
SOX1O00570 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC22.44■■□□□ 1.18
SOX1O00570 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
SOX1O00570 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
SOX1O00570 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
SOX1O00570 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC22.44■■□□□ 1.18
SOX1O00570 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
SOX1O00570 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC22.44■■□□□ 1.18
SOX1O00570 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC22.44■■□□□ 1.18
SOX1O00570 AC087633.2-202ENST00000565166 1439 ntBASIC22.44■■□□□ 1.18
SOX1O00570 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC22.44■■□□□ 1.18
SOX1O00570 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
SOX1O00570 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC22.44■■□□□ 1.18
SOX1O00570 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
SOX1O00570 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC22.44■■□□□ 1.18
SOX1O00570 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
SOX1O00570 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
SOX1O00570 NXN-202ENST00000537628 1340 ntTSL 3 BASIC22.43■■□□□ 1.18
SOX1O00570 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
SOX1O00570 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
SOX1O00570 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
SOX1O00570 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
SOX1O00570 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
SOX1O00570 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC22.43■■□□□ 1.18
SOX1O00570 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC22.43■■□□□ 1.18
SOX1O00570 RBM17P1-201ENST00000453646 1190 ntBASIC22.43■■□□□ 1.18
SOX1O00570 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
SOX1O00570 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC22.43■■□□□ 1.18
SOX1O00570 AL034346.1-201ENST00000568244 1277 ntBASIC22.43■■□□□ 1.18
SOX1O00570 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
SOX1O00570 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
SOX1O00570 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
SOX1O00570 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
SOX1O00570 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms