Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
CLDN5O00501 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
CLDN5O00501 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC22.09■■□□□ 1.13
CLDN5O00501 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC22.09■■□□□ 1.13
CLDN5O00501 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
CLDN5O00501 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC22.09■■□□□ 1.13
CLDN5O00501 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
CLDN5O00501 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CLDN5O00501 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
CLDN5O00501 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.13
CLDN5O00501 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CLDN5O00501 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CLDN5O00501 AC243732.1-201ENST00000612648 864 ntBASIC22.08■■□□□ 1.13
CLDN5O00501 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CLDN5O00501 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CLDN5O00501 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
CLDN5O00501 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
CLDN5O00501 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
CLDN5O00501 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CLDN5O00501 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CLDN5O00501 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
CLDN5O00501 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CLDN5O00501 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
CLDN5O00501 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CLDN5O00501 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CLDN5O00501 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC22.07■■□□□ 1.12
CLDN5O00501 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC22.07■■□□□ 1.12
CLDN5O00501 NCF1B-203ENST00000435988 1254 ntBASIC22.07■■□□□ 1.12
CLDN5O00501 AC007322.4-201ENST00000509611 723 ntBASIC22.07■■□□□ 1.12
CLDN5O00501 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC22.07■■□□□ 1.12
CLDN5O00501 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
CLDN5O00501 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC22.07■■□□□ 1.12
CLDN5O00501 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
CLDN5O00501 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC22.07■■□□□ 1.12
CLDN5O00501 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CLDN5O00501 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC22.07■■□□□ 1.12
CLDN5O00501 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
CLDN5O00501 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC22.06■■□□□ 1.12
CLDN5O00501 CYP2T1P-201ENST00000432607 1285 ntBASIC22.06■■□□□ 1.12
CLDN5O00501 AC245052.3-201ENST00000450182 901 ntBASIC22.06■■□□□ 1.12
CLDN5O00501 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC22.06■■□□□ 1.12
CLDN5O00501 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC22.06■■□□□ 1.12
CLDN5O00501 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CLDN5O00501 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC22.06■■□□□ 1.12
CLDN5O00501 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
CLDN5O00501 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC22.05■■□□□ 1.12
CLDN5O00501 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC22.05■■□□□ 1.12
CLDN5O00501 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CLDN5O00501 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC22.05■■□□□ 1.12
CLDN5O00501 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CLDN5O00501 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC22.05■■□□□ 1.12
CLDN5O00501 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CLDN5O00501 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CLDN5O00501 AC091799.1-201ENST00000422823 811 ntBASIC22.05■■□□□ 1.12
CLDN5O00501 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
CLDN5O00501 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CLDN5O00501 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
CLDN5O00501 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CLDN5O00501 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC22.05■■□□□ 1.12
CLDN5O00501 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC22.05■■□□□ 1.12
CLDN5O00501 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
CLDN5O00501 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CLDN5O00501 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC22.04■■□□□ 1.12
CLDN5O00501 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
CLDN5O00501 METTL15-202ENST00000403099 795 ntTSL 5 BASIC22.04■■□□□ 1.12
CLDN5O00501 AC083906.2-201ENST00000511578 360 ntBASIC22.04■■□□□ 1.12
CLDN5O00501 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CLDN5O00501 AC016405.3-201ENST00000607710 860 ntBASIC22.04■■□□□ 1.12
CLDN5O00501 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC22.04■■□□□ 1.12
CLDN5O00501 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC22.04■■□□□ 1.12
CLDN5O00501 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC22.04■■□□□ 1.12
CLDN5O00501 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CLDN5O00501 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CLDN5O00501 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CLDN5O00501 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
CLDN5O00501 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CLDN5O00501 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CLDN5O00501 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
CLDN5O00501 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC22.03■■□□□ 1.12
CLDN5O00501 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CLDN5O00501 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CLDN5O00501 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CLDN5O00501 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC22.03■■□□□ 1.12
CLDN5O00501 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CLDN5O00501 AC104771.1-201ENST00000603335 964 ntBASIC22.03■■□□□ 1.12
CLDN5O00501 AL121832.2-201ENST00000610979 668 ntBASIC22.03■■□□□ 1.12
CLDN5O00501 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CLDN5O00501 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
CLDN5O00501 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC22.02■■□□□ 1.12
CLDN5O00501 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC22.02■■□□□ 1.12
CLDN5O00501 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC22.02■■□□□ 1.12
CLDN5O00501 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CLDN5O00501 GPX1P1-201ENST00000388829 606 ntBASIC22.02■■□□□ 1.12
CLDN5O00501 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
CLDN5O00501 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC22.02■■□□□ 1.12
CLDN5O00501 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC22.02■■□□□ 1.12
CLDN5O00501 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CLDN5O00501 AL591742.1-201ENST00000604433 565 ntBASIC22.02■■□□□ 1.12
CLDN5O00501 AL109923.1-201ENST00000618799 583 ntBASIC22.02■■□□□ 1.12
CLDN5O00501 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC22.02■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms