Protein–RNA interactions for Protein: A6NLX3

SPDYE4, Speedy protein E4, humanhuman

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE4A6NLX3 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC23.3■■□□□ 1.32
SPDYE4A6NLX3 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC23.3■■□□□ 1.32
SPDYE4A6NLX3 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
SPDYE4A6NLX3 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC23.3■■□□□ 1.32
SPDYE4A6NLX3 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC23.3■■□□□ 1.32
SPDYE4A6NLX3 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
SPDYE4A6NLX3 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
SPDYE4A6NLX3 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
SPDYE4A6NLX3 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SPDYE4A6NLX3 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
SPDYE4A6NLX3 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
SPDYE4A6NLX3 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
SPDYE4A6NLX3 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SPDYE4A6NLX3 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC23.3■■□□□ 1.32
SPDYE4A6NLX3 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC23.3■■□□□ 1.32
SPDYE4A6NLX3 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC23.29■■□□□ 1.32
SPDYE4A6NLX3 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC23.29■■□□□ 1.32
SPDYE4A6NLX3 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC23.29■■□□□ 1.32
SPDYE4A6NLX3 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC23.29■■□□□ 1.32
SPDYE4A6NLX3 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC23.29■■□□□ 1.32
SPDYE4A6NLX3 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SPDYE4A6NLX3 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC23.29■■□□□ 1.32
SPDYE4A6NLX3 TK2-208ENST00000545043 1120 ntTSL 2 BASIC23.29■■□□□ 1.32
SPDYE4A6NLX3 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC23.29■■□□□ 1.32
SPDYE4A6NLX3 AKR1B10P2-201ENST00000577332 927 ntBASIC23.29■■□□□ 1.32
SPDYE4A6NLX3 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC23.29■■□□□ 1.32
SPDYE4A6NLX3 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SPDYE4A6NLX3 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC23.29■■□□□ 1.32
SPDYE4A6NLX3 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SPDYE4A6NLX3 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SPDYE4A6NLX3 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
SPDYE4A6NLX3 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SPDYE4A6NLX3 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC23.28■■□□□ 1.32
SPDYE4A6NLX3 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC23.28■■□□□ 1.32
SPDYE4A6NLX3 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SPDYE4A6NLX3 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SPDYE4A6NLX3 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SPDYE4A6NLX3 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
SPDYE4A6NLX3 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SPDYE4A6NLX3 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
SPDYE4A6NLX3 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC23.28■■□□□ 1.32
SPDYE4A6NLX3 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
SPDYE4A6NLX3 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC23.28■■□□□ 1.32
SPDYE4A6NLX3 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC23.28■■□□□ 1.32
SPDYE4A6NLX3 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC23.28■■□□□ 1.32
SPDYE4A6NLX3 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SPDYE4A6NLX3 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SPDYE4A6NLX3 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC23.28■■□□□ 1.32
SPDYE4A6NLX3 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SPDYE4A6NLX3 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
SPDYE4A6NLX3 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
SPDYE4A6NLX3 AC010542.4-201ENST00000563151 1910 ntBASIC23.27■■□□□ 1.32
SPDYE4A6NLX3 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC23.27■■□□□ 1.32
SPDYE4A6NLX3 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
SPDYE4A6NLX3 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
SPDYE4A6NLX3 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC23.27■■□□□ 1.32
SPDYE4A6NLX3 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC23.27■■□□□ 1.32
SPDYE4A6NLX3 CAMTA1-205ENST00000467404 546 ntTSL 3 BASIC23.27■■□□□ 1.32
SPDYE4A6NLX3 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC23.27■■□□□ 1.32
SPDYE4A6NLX3 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC23.27■■□□□ 1.32
SPDYE4A6NLX3 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC23.27■■□□□ 1.32
SPDYE4A6NLX3 AC087239.1-201ENST00000622671 572 ntBASIC23.27■■□□□ 1.32
SPDYE4A6NLX3 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
SPDYE4A6NLX3 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
SPDYE4A6NLX3 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
SPDYE4A6NLX3 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC23.27■■□□□ 1.32
SPDYE4A6NLX3 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
SPDYE4A6NLX3 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC23.27■■□□□ 1.32
SPDYE4A6NLX3 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.31
SPDYE4A6NLX3 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SPDYE4A6NLX3 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SPDYE4A6NLX3 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC23.26■■□□□ 1.31
SPDYE4A6NLX3 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
SPDYE4A6NLX3 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
SPDYE4A6NLX3 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
SPDYE4A6NLX3 DENND3-207ENST00000518347 850 ntTSL 2 BASIC23.26■■□□□ 1.31
SPDYE4A6NLX3 DBI-210ENST00000542275 757 ntTSL 5 BASIC23.26■■□□□ 1.31
SPDYE4A6NLX3 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SPDYE4A6NLX3 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
SPDYE4A6NLX3 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SPDYE4A6NLX3 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
SPDYE4A6NLX3 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SPDYE4A6NLX3 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC23.26■■□□□ 1.31
SPDYE4A6NLX3 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC23.26■■□□□ 1.31
SPDYE4A6NLX3 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
SPDYE4A6NLX3 AC087289.5-201ENST00000586076 3175 ntBASIC23.26■■□□□ 1.31
SPDYE4A6NLX3 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
SPDYE4A6NLX3 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC23.25■■□□□ 1.31
SPDYE4A6NLX3 AL020996.1-203ENST00000536896 2307 ntBASIC23.25■■□□□ 1.31
SPDYE4A6NLX3 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
SPDYE4A6NLX3 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
SPDYE4A6NLX3 TNFRSF10A-AS1-201ENST00000518308 637 ntTSL 3 BASIC23.25■■□□□ 1.31
SPDYE4A6NLX3 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC23.25■■□□□ 1.31
SPDYE4A6NLX3 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC23.25■■□□□ 1.31
SPDYE4A6NLX3 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC23.25■■□□□ 1.31
SPDYE4A6NLX3 GXYLT1P5-201ENST00000614548 1189 ntBASIC23.25■■□□□ 1.31
SPDYE4A6NLX3 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SPDYE4A6NLX3 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SPDYE4A6NLX3 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
SPDYE4A6NLX3 AC004687.1-201ENST00000579003 1625 ntBASIC23.25■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms