Protein–RNA interactions for Protein: A4FU49

SH3D21, SH3 domain-containing protein 21, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21A4FU49 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
SH3D21A4FU49 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SH3D21A4FU49 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SH3D21A4FU49 LINC02228-203ENST00000641970 1355 ntBASIC19.3■□□□□ 0.68
SH3D21A4FU49 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.3■□□□□ 0.68
SH3D21A4FU49 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SH3D21A4FU49 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.3■□□□□ 0.68
SH3D21A4FU49 AL049796.1-201ENST00000565336 1766 ntBASIC19.29■□□□□ 0.68
SH3D21A4FU49 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SH3D21A4FU49 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SH3D21A4FU49 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SH3D21A4FU49 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
SH3D21A4FU49 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SH3D21A4FU49 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SH3D21A4FU49 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SH3D21A4FU49 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.29■□□□□ 0.68
SH3D21A4FU49 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SH3D21A4FU49 RARRES2P11-201ENST00000635158 484 ntBASIC19.29■□□□□ 0.68
SH3D21A4FU49 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SH3D21A4FU49 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SH3D21A4FU49 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SH3D21A4FU49 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
SH3D21A4FU49 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SH3D21A4FU49 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.29■□□□□ 0.68
SH3D21A4FU49 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.29■□□□□ 0.68
SH3D21A4FU49 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.29■□□□□ 0.68
SH3D21A4FU49 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SH3D21A4FU49 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SH3D21A4FU49 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.29■□□□□ 0.68
SH3D21A4FU49 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SH3D21A4FU49 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
SH3D21A4FU49 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.28■□□□□ 0.68
SH3D21A4FU49 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.28■□□□□ 0.68
SH3D21A4FU49 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.28■□□□□ 0.68
SH3D21A4FU49 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.28■□□□□ 0.68
SH3D21A4FU49 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.28■□□□□ 0.68
SH3D21A4FU49 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SH3D21A4FU49 OR7E47P-201ENST00000546390 1422 ntBASIC19.28■□□□□ 0.68
SH3D21A4FU49 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
SH3D21A4FU49 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SH3D21A4FU49 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.28■□□□□ 0.68
SH3D21A4FU49 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SH3D21A4FU49 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SH3D21A4FU49 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.28■□□□□ 0.68
SH3D21A4FU49 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SH3D21A4FU49 AC090192.1-201ENST00000517740 490 ntBASIC19.28■□□□□ 0.68
SH3D21A4FU49 KRT18P14-201ENST00000534205 1250 ntBASIC19.28■□□□□ 0.68
SH3D21A4FU49 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.28■□□□□ 0.68
SH3D21A4FU49 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
SH3D21A4FU49 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SH3D21A4FU49 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SH3D21A4FU49 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SH3D21A4FU49 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SH3D21A4FU49 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
SH3D21A4FU49 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SH3D21A4FU49 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.27■□□□□ 0.68
SH3D21A4FU49 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SH3D21A4FU49 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
SH3D21A4FU49 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.27■□□□□ 0.68
SH3D21A4FU49 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.27■□□□□ 0.68
SH3D21A4FU49 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SH3D21A4FU49 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19.27■□□□□ 0.68
SH3D21A4FU49 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.27■□□□□ 0.68
SH3D21A4FU49 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.27■□□□□ 0.68
SH3D21A4FU49 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.27■□□□□ 0.68
SH3D21A4FU49 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
SH3D21A4FU49 AC105233.4-201ENST00000642045 216 ntBASIC19.27■□□□□ 0.68
SH3D21A4FU49 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SH3D21A4FU49 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SH3D21A4FU49 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.27■□□□□ 0.67
SH3D21A4FU49 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SH3D21A4FU49 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SH3D21A4FU49 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.67
SH3D21A4FU49 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SH3D21A4FU49 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SH3D21A4FU49 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
SH3D21A4FU49 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SH3D21A4FU49 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
SH3D21A4FU49 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.26■□□□□ 0.67
SH3D21A4FU49 TERF1P2-201ENST00000583350 1212 ntBASIC19.26■□□□□ 0.67
SH3D21A4FU49 NTF6G-201ENST00000591094 616 ntBASIC19.26■□□□□ 0.67
SH3D21A4FU49 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.26■□□□□ 0.67
SH3D21A4FU49 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SH3D21A4FU49 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SH3D21A4FU49 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.26■□□□□ 0.67
SH3D21A4FU49 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
SH3D21A4FU49 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SH3D21A4FU49 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SH3D21A4FU49 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SH3D21A4FU49 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
SH3D21A4FU49 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SH3D21A4FU49 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SH3D21A4FU49 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SH3D21A4FU49 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SH3D21A4FU49 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SH3D21A4FU49 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
SH3D21A4FU49 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SH3D21A4FU49 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SH3D21A4FU49 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.25■□□□□ 0.67
SH3D21A4FU49 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms