Protein–RNA interactions for Protein: A0A0B4J276

TRAV25, T-cell receptor alpha variable 25 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV25A0A0B4J276 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC15.69■□□□□ 0.1
TRAV25A0A0B4J276 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC15.69■□□□□ 0.1
TRAV25A0A0B4J276 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV25A0A0B4J276 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV25A0A0B4J276 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV25A0A0B4J276 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC15.68■□□□□ 0.1
TRAV25A0A0B4J276 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC15.68■□□□□ 0.1
TRAV25A0A0B4J276 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV25A0A0B4J276 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
TRAV25A0A0B4J276 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV25A0A0B4J276 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV25A0A0B4J276 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV25A0A0B4J276 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC15.68■□□□□ 0.1
TRAV25A0A0B4J276 AC007322.1-201ENST00000426983 750 ntBASIC15.68■□□□□ 0.1
TRAV25A0A0B4J276 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC15.68■□□□□ 0.1
TRAV25A0A0B4J276 AL162412.1-201ENST00000567129 965 ntBASIC15.68■□□□□ 0.1
TRAV25A0A0B4J276 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC15.68■□□□□ 0.1
TRAV25A0A0B4J276 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
TRAV25A0A0B4J276 PARP1-210ENST00000629232 477 ntTSL 5 BASIC15.68■□□□□ 0.1
TRAV25A0A0B4J276 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV25A0A0B4J276 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV25A0A0B4J276 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV25A0A0B4J276 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV25A0A0B4J276 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV25A0A0B4J276 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV25A0A0B4J276 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC15.68■□□□□ 0.1
TRAV25A0A0B4J276 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
TRAV25A0A0B4J276 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
TRAV25A0A0B4J276 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV25A0A0B4J276 RNF165-205ENST00000588679 2904 ntBASIC15.67■□□□□ 0.1
TRAV25A0A0B4J276 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV25A0A0B4J276 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV25A0A0B4J276 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC15.67■□□□□ 0.1
TRAV25A0A0B4J276 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
TRAV25A0A0B4J276 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV25A0A0B4J276 AC026185.1-201ENST00000445748 174 ntBASIC15.67■□□□□ 0.1
TRAV25A0A0B4J276 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC15.67■□□□□ 0.1
TRAV25A0A0B4J276 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC15.67■□□□□ 0.1
TRAV25A0A0B4J276 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC15.67■□□□□ 0.1
TRAV25A0A0B4J276 AC073111.5-205ENST00000641717 521 ntBASIC15.67■□□□□ 0.1
TRAV25A0A0B4J276 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
TRAV25A0A0B4J276 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV25A0A0B4J276 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV25A0A0B4J276 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV25A0A0B4J276 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV25A0A0B4J276 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV25A0A0B4J276 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
TRAV25A0A0B4J276 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC15.66■□□□□ 0.1
TRAV25A0A0B4J276 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV25A0A0B4J276 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC15.66■□□□□ 0.1
TRAV25A0A0B4J276 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
TRAV25A0A0B4J276 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC15.66■□□□□ 0.1
TRAV25A0A0B4J276 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC15.66■□□□□ 0.1
TRAV25A0A0B4J276 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV25A0A0B4J276 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV25A0A0B4J276 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC15.66■□□□□ 0.1
TRAV25A0A0B4J276 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC15.66■□□□□ 0.1
TRAV25A0A0B4J276 FGF8-207ENST00000618991 856 ntTSL 3 BASIC15.66■□□□□ 0.1
TRAV25A0A0B4J276 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
TRAV25A0A0B4J276 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV25A0A0B4J276 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC15.66■□□□□ 0.1
TRAV25A0A0B4J276 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV25A0A0B4J276 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC15.66■□□□□ 0.1
TRAV25A0A0B4J276 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV25A0A0B4J276 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV25A0A0B4J276 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV25A0A0B4J276 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV25A0A0B4J276 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC15.65■□□□□ 0.1
TRAV25A0A0B4J276 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC15.65■□□□□ 0.1
TRAV25A0A0B4J276 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV25A0A0B4J276 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV25A0A0B4J276 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV25A0A0B4J276 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV25A0A0B4J276 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
TRAV25A0A0B4J276 BMP1-204ENST00000397814 836 ntTSL 4 BASIC15.65■□□□□ 0.1
TRAV25A0A0B4J276 BET1L-204ENST00000410108 637 ntTSL 3 BASIC15.65■□□□□ 0.1
TRAV25A0A0B4J276 CDV3P1-201ENST00000471403 739 ntBASIC15.65■□□□□ 0.1
TRAV25A0A0B4J276 PBX1-209ENST00000485769 834 ntTSL 2 BASIC15.65■□□□□ 0.1
TRAV25A0A0B4J276 AL591742.1-201ENST00000604433 565 ntBASIC15.65■□□□□ 0.1
TRAV25A0A0B4J276 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC15.65■□□□□ 0.1
TRAV25A0A0B4J276 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV25A0A0B4J276 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV25A0A0B4J276 RARRES2P11-201ENST00000635158 484 ntBASIC15.65■□□□□ 0.1
TRAV25A0A0B4J276 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC15.65■□□□□ 0.1
TRAV25A0A0B4J276 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC15.65■□□□□ 0.1
TRAV25A0A0B4J276 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV25A0A0B4J276 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV25A0A0B4J276 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC15.65■□□□□ 0.1
TRAV25A0A0B4J276 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV25A0A0B4J276 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV25A0A0B4J276 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV25A0A0B4J276 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV25A0A0B4J276 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.1
TRAV25A0A0B4J276 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
TRAV25A0A0B4J276 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV25A0A0B4J276 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV25A0A0B4J276 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV25A0A0B4J276 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC15.64■□□□□ 0.09
TRAV25A0A0B4J276 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC15.64■□□□□ 0.09
TRAV25A0A0B4J276 Z98882.1-201ENST00000622160 2253 ntBASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms