Protein–RNA interactions for Protein: A0A0B4J271

TRAV12-3, T-cell receptor alpha variable 12-3 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3A0A0B4J271 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC15.48■□□□□ 0.07
TRAV12-3A0A0B4J271 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC15.48■□□□□ 0.07
TRAV12-3A0A0B4J271 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
TRAV12-3A0A0B4J271 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC15.48■□□□□ 0.07
TRAV12-3A0A0B4J271 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC15.48■□□□□ 0.07
TRAV12-3A0A0B4J271 AL136967.2-201ENST00000623968 743 ntBASIC15.48■□□□□ 0.07
TRAV12-3A0A0B4J271 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC15.48■□□□□ 0.07
TRAV12-3A0A0B4J271 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC15.48■□□□□ 0.07
TRAV12-3A0A0B4J271 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV12-3A0A0B4J271 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV12-3A0A0B4J271 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC15.48■□□□□ 0.07
TRAV12-3A0A0B4J271 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC15.48■□□□□ 0.07
TRAV12-3A0A0B4J271 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV12-3A0A0B4J271 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC15.47■□□□□ 0.07
TRAV12-3A0A0B4J271 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC15.47■□□□□ 0.07
TRAV12-3A0A0B4J271 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC15.47■□□□□ 0.07
TRAV12-3A0A0B4J271 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV12-3A0A0B4J271 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC15.47■□□□□ 0.07
TRAV12-3A0A0B4J271 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
TRAV12-3A0A0B4J271 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
TRAV12-3A0A0B4J271 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC15.47■□□□□ 0.07
TRAV12-3A0A0B4J271 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
TRAV12-3A0A0B4J271 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV12-3A0A0B4J271 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV12-3A0A0B4J271 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV12-3A0A0B4J271 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV12-3A0A0B4J271 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC15.47■□□□□ 0.07
TRAV12-3A0A0B4J271 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV12-3A0A0B4J271 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC15.47■□□□□ 0.07
TRAV12-3A0A0B4J271 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC15.47■□□□□ 0.07
TRAV12-3A0A0B4J271 AC055733.4-201ENST00000638462 1354 ntBASIC15.47■□□□□ 0.07
TRAV12-3A0A0B4J271 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV12-3A0A0B4J271 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC15.47■□□□□ 0.07
TRAV12-3A0A0B4J271 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV12-3A0A0B4J271 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV12-3A0A0B4J271 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV12-3A0A0B4J271 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV12-3A0A0B4J271 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV12-3A0A0B4J271 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
TRAV12-3A0A0B4J271 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV12-3A0A0B4J271 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV12-3A0A0B4J271 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC15.46■□□□□ 0.07
TRAV12-3A0A0B4J271 STX5-203ENST00000394690 1568 ntTSL 5 BASIC15.46■□□□□ 0.07
TRAV12-3A0A0B4J271 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
TRAV12-3A0A0B4J271 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV12-3A0A0B4J271 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV12-3A0A0B4J271 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV12-3A0A0B4J271 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV12-3A0A0B4J271 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC15.46■□□□□ 0.07
TRAV12-3A0A0B4J271 AL139246.5-201ENST00000606645 996 ntBASIC15.46■□□□□ 0.07
TRAV12-3A0A0B4J271 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV12-3A0A0B4J271 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
TRAV12-3A0A0B4J271 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.07
TRAV12-3A0A0B4J271 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV12-3A0A0B4J271 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV12-3A0A0B4J271 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC15.46■□□□□ 0.07
TRAV12-3A0A0B4J271 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC15.46■□□□□ 0.06
TRAV12-3A0A0B4J271 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
TRAV12-3A0A0B4J271 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV12-3A0A0B4J271 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC15.45■□□□□ 0.06
TRAV12-3A0A0B4J271 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV12-3A0A0B4J271 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC15.45■□□□□ 0.06
TRAV12-3A0A0B4J271 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV12-3A0A0B4J271 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV12-3A0A0B4J271 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV12-3A0A0B4J271 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
TRAV12-3A0A0B4J271 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV12-3A0A0B4J271 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV12-3A0A0B4J271 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC15.45■□□□□ 0.06
TRAV12-3A0A0B4J271 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV12-3A0A0B4J271 AL031432.3-201ENST00000607698 485 ntBASIC15.45■□□□□ 0.06
TRAV12-3A0A0B4J271 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV12-3A0A0B4J271 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV12-3A0A0B4J271 STX6-204ENST00000542060 4809 ntTSL 2 BASIC15.45■□□□□ 0.06
TRAV12-3A0A0B4J271 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
TRAV12-3A0A0B4J271 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV12-3A0A0B4J271 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV12-3A0A0B4J271 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV12-3A0A0B4J271 MPST-204ENST00000404393 1329 ntTSL 5 BASIC15.44■□□□□ 0.06
TRAV12-3A0A0B4J271 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
TRAV12-3A0A0B4J271 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV12-3A0A0B4J271 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV12-3A0A0B4J271 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV12-3A0A0B4J271 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
TRAV12-3A0A0B4J271 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV12-3A0A0B4J271 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV12-3A0A0B4J271 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV12-3A0A0B4J271 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC15.44■□□□□ 0.06
TRAV12-3A0A0B4J271 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV12-3A0A0B4J271 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV12-3A0A0B4J271 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC15.44■□□□□ 0.06
TRAV12-3A0A0B4J271 AC142381.2-201ENST00000566120 298 ntBASIC15.44■□□□□ 0.06
TRAV12-3A0A0B4J271 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
TRAV12-3A0A0B4J271 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV12-3A0A0B4J271 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV12-3A0A0B4J271 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV12-3A0A0B4J271 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV12-3A0A0B4J271 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV12-3A0A0B4J271 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
TRAV12-3A0A0B4J271 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms