Protein–RNA interactions for Protein: A0A0B4J268

TRAV4, T-cell receptor alpha variable 4 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4A0A0B4J268 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV4A0A0B4J268 NME4-202ENST00000382940 766 ntTSL 3 BASIC15□□□□□ -0.01
TRAV4A0A0B4J268 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC15□□□□□ -0.01
TRAV4A0A0B4J268 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC15□□□□□ -0.01
TRAV4A0A0B4J268 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC15□□□□□ -0.01
TRAV4A0A0B4J268 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC15□□□□□ -0.01
TRAV4A0A0B4J268 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC15□□□□□ -0.01
TRAV4A0A0B4J268 NME4-211ENST00000620944 1193 ntTSL 2 BASIC15□□□□□ -0.01
TRAV4A0A0B4J268 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV4A0A0B4J268 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV4A0A0B4J268 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV4A0A0B4J268 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV4A0A0B4J268 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
TRAV4A0A0B4J268 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV4A0A0B4J268 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV4A0A0B4J268 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC14.99□□□□□ -0.01
TRAV4A0A0B4J268 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
TRAV4A0A0B4J268 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV4A0A0B4J268 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV4A0A0B4J268 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC14.99□□□□□ -0.01
TRAV4A0A0B4J268 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC14.99□□□□□ -0.01
TRAV4A0A0B4J268 NT5C3AP1-201ENST00000394500 1012 ntBASIC14.99□□□□□ -0.01
TRAV4A0A0B4J268 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC14.99□□□□□ -0.01
TRAV4A0A0B4J268 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC14.99□□□□□ -0.01
TRAV4A0A0B4J268 AC005837.3-201ENST00000612163 286 ntBASIC14.99□□□□□ -0.01
TRAV4A0A0B4J268 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC14.99□□□□□ -0.01
TRAV4A0A0B4J268 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
TRAV4A0A0B4J268 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV4A0A0B4J268 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV4A0A0B4J268 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV4A0A0B4J268 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV4A0A0B4J268 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
TRAV4A0A0B4J268 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC14.99□□□□□ -0.01
TRAV4A0A0B4J268 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV4A0A0B4J268 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV4A0A0B4J268 AL049796.1-201ENST00000565336 1766 ntBASIC14.98□□□□□ -0.01
TRAV4A0A0B4J268 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV4A0A0B4J268 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC14.98□□□□□ -0.01
TRAV4A0A0B4J268 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV4A0A0B4J268 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV4A0A0B4J268 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV4A0A0B4J268 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC14.98□□□□□ -0.01
TRAV4A0A0B4J268 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
TRAV4A0A0B4J268 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV4A0A0B4J268 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV4A0A0B4J268 HYI-206ENST00000372434 1025 ntTSL 5 BASIC14.98□□□□□ -0.01
TRAV4A0A0B4J268 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC14.98□□□□□ -0.01
TRAV4A0A0B4J268 MTURN-203ENST00000409688 843 ntTSL 2 BASIC14.98□□□□□ -0.01
TRAV4A0A0B4J268 RHOF-204ENST00000537265 699 ntTSL 2 BASIC14.98□□□□□ -0.01
TRAV4A0A0B4J268 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV4A0A0B4J268 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV4A0A0B4J268 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
TRAV4A0A0B4J268 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV4A0A0B4J268 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV4A0A0B4J268 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV4A0A0B4J268 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
TRAV4A0A0B4J268 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV4A0A0B4J268 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
TRAV4A0A0B4J268 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC14.97□□□□□ -0.01
TRAV4A0A0B4J268 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV4A0A0B4J268 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV4A0A0B4J268 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV4A0A0B4J268 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC14.97□□□□□ -0.01
TRAV4A0A0B4J268 IRS3P-201ENST00000223076 1006 ntBASIC14.97□□□□□ -0.01
TRAV4A0A0B4J268 RNF146-206ENST00000480444 843 ntTSL 2 BASIC14.97□□□□□ -0.01
TRAV4A0A0B4J268 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC14.97□□□□□ -0.01
TRAV4A0A0B4J268 TPRG1LP1-201ENST00000598702 760 ntBASIC14.97□□□□□ -0.01
TRAV4A0A0B4J268 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC14.97□□□□□ -0.01
TRAV4A0A0B4J268 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV4A0A0B4J268 CPT2-209ENST00000636935 803 ntTSL 5 BASIC14.97□□□□□ -0.01
TRAV4A0A0B4J268 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV4A0A0B4J268 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC14.97□□□□□ -0.01
TRAV4A0A0B4J268 RARG-204ENST00000543726 1779 ntTSL 2 BASIC14.97□□□□□ -0.01
TRAV4A0A0B4J268 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV4A0A0B4J268 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC14.97□□□□□ -0.01
TRAV4A0A0B4J268 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC14.97□□□□□ -0.01
TRAV4A0A0B4J268 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV4A0A0B4J268 MFF-207ENST00000409565 1548 ntTSL 2 BASIC14.97□□□□□ -0.01
TRAV4A0A0B4J268 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRAV4A0A0B4J268 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC14.96□□□□□ -0.01
TRAV4A0A0B4J268 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC14.96□□□□□ -0.01
TRAV4A0A0B4J268 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRAV4A0A0B4J268 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRAV4A0A0B4J268 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
TRAV4A0A0B4J268 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC14.96□□□□□ -0.01
TRAV4A0A0B4J268 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC14.96□□□□□ -0.01
TRAV4A0A0B4J268 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TRAV4A0A0B4J268 AC105265.2-201ENST00000467189 838 ntBASIC14.96□□□□□ -0.01
TRAV4A0A0B4J268 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TRAV4A0A0B4J268 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC14.96□□□□□ -0.01
TRAV4A0A0B4J268 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRAV4A0A0B4J268 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC14.96□□□□□ -0.01
TRAV4A0A0B4J268 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC14.96□□□□□ -0.01
TRAV4A0A0B4J268 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC14.96□□□□□ -0.01
TRAV4A0A0B4J268 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC14.96□□□□□ -0.01
TRAV4A0A0B4J268 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
TRAV4A0A0B4J268 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC14.96□□□□□ -0.02
TRAV4A0A0B4J268 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
TRAV4A0A0B4J268 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV4A0A0B4J268 MCC-208ENST00000514701 2855 ntTSL 2 BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms