Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRAV27A0A087WT01 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC18.88■□□□□ 0.61
TRAV27A0A087WT01 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TRAV27A0A087WT01 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC18.88■□□□□ 0.61
TRAV27A0A087WT01 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC18.88■□□□□ 0.61
TRAV27A0A087WT01 MPST-204ENST00000404393 1329 ntTSL 5 BASIC18.88■□□□□ 0.61
TRAV27A0A087WT01 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC18.88■□□□□ 0.61
TRAV27A0A087WT01 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRAV27A0A087WT01 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.88■□□□□ 0.61
TRAV27A0A087WT01 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRAV27A0A087WT01 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRAV27A0A087WT01 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRAV27A0A087WT01 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TRAV27A0A087WT01 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRAV27A0A087WT01 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRAV27A0A087WT01 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRAV27A0A087WT01 AC092667.1-201ENST00000434301 2586 ntBASIC18.88■□□□□ 0.61
TRAV27A0A087WT01 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
TRAV27A0A087WT01 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRAV27A0A087WT01 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
TRAV27A0A087WT01 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRAV27A0A087WT01 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRAV27A0A087WT01 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TRAV27A0A087WT01 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
TRAV27A0A087WT01 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.87■□□□□ 0.61
TRAV27A0A087WT01 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.87■□□□□ 0.61
TRAV27A0A087WT01 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TRAV27A0A087WT01 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC18.87■□□□□ 0.61
TRAV27A0A087WT01 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRAV27A0A087WT01 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TRAV27A0A087WT01 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRAV27A0A087WT01 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.87■□□□□ 0.61
TRAV27A0A087WT01 RNF146-206ENST00000480444 843 ntTSL 2 BASIC18.87■□□□□ 0.61
TRAV27A0A087WT01 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
TRAV27A0A087WT01 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC18.87■□□□□ 0.61
TRAV27A0A087WT01 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
TRAV27A0A087WT01 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRAV27A0A087WT01 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRAV27A0A087WT01 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
TRAV27A0A087WT01 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC18.86■□□□□ 0.61
TRAV27A0A087WT01 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
TRAV27A0A087WT01 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC18.86■□□□□ 0.61
TRAV27A0A087WT01 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRAV27A0A087WT01 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRAV27A0A087WT01 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
TRAV27A0A087WT01 SUDS3P1-201ENST00000505831 966 ntBASIC18.86■□□□□ 0.61
TRAV27A0A087WT01 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC18.86■□□□□ 0.61
TRAV27A0A087WT01 AC012414.1-201ENST00000556676 535 ntBASIC18.86■□□□□ 0.61
TRAV27A0A087WT01 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRAV27A0A087WT01 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRAV27A0A087WT01 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.86■□□□□ 0.61
TRAV27A0A087WT01 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
TRAV27A0A087WT01 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.86■□□□□ 0.61
TRAV27A0A087WT01 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.86■□□□□ 0.61
TRAV27A0A087WT01 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRAV27A0A087WT01 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.85■□□□□ 0.61
TRAV27A0A087WT01 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRAV27A0A087WT01 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.85■□□□□ 0.61
TRAV27A0A087WT01 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
TRAV27A0A087WT01 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRAV27A0A087WT01 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRAV27A0A087WT01 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRAV27A0A087WT01 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRAV27A0A087WT01 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TRAV27A0A087WT01 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRAV27A0A087WT01 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TRAV27A0A087WT01 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRAV27A0A087WT01 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRAV27A0A087WT01 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
TRAV27A0A087WT01 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRAV27A0A087WT01 AC121338.2-201ENST00000622535 1744 ntBASIC18.85■□□□□ 0.61
TRAV27A0A087WT01 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
TRAV27A0A087WT01 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC18.85■□□□□ 0.61
TRAV27A0A087WT01 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
TRAV27A0A087WT01 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV27A0A087WT01 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
TRAV27A0A087WT01 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV27A0A087WT01 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV27A0A087WT01 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV27A0A087WT01 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV27A0A087WT01 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV27A0A087WT01 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV27A0A087WT01 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV27A0A087WT01 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.84■□□□□ 0.61
TRAV27A0A087WT01 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV27A0A087WT01 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC18.84■□□□□ 0.61
TRAV27A0A087WT01 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV27A0A087WT01 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC18.84■□□□□ 0.61
TRAV27A0A087WT01 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC18.84■□□□□ 0.61
TRAV27A0A087WT01 AL139246.5-201ENST00000606645 996 ntBASIC18.84■□□□□ 0.61
TRAV27A0A087WT01 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC18.84■□□□□ 0.61
TRAV27A0A087WT01 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC18.84■□□□□ 0.61
TRAV27A0A087WT01 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
TRAV27A0A087WT01 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
TRAV27A0A087WT01 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV27A0A087WT01 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.84■□□□□ 0.61
TRAV27A0A087WT01 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
TRAV27A0A087WT01 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV27A0A087WT01 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
TRAV27A0A087WT01 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.83■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms