Protein–RNA interactions for Protein: Q6PIF2

SYCE2, Synaptonemal complex central element protein 2, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE2Q6PIF2 ZRANB2-AS2-224ENST00000626344 400 ntTSL 5 BASIC10.72□□□□□ -0.69
SYCE2Q6PIF2 AL627171.2-201ENST00000635177 1090 ntTSL 5 BASIC10.72□□□□□ -0.69
SYCE2Q6PIF2 MS4A8-201ENST00000300226 1353 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
SYCE2Q6PIF2 CALCOCO2-203ENST00000416445 1438 ntAPPRIS ALT2 TSL 2 BASIC10.72□□□□□ -0.69
SYCE2Q6PIF2 CUX1-212ENST00000547394 2878 ntTSL 2 BASIC10.72□□□□□ -0.69
SYCE2Q6PIF2 GALNT15-201ENST00000339732 4669 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
SYCE2Q6PIF2 MPI-201ENST00000323744 1619 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
SYCE2Q6PIF2 STK32A-203ENST00000398523 1637 ntTSL 2 BASIC10.72□□□□□ -0.69
SYCE2Q6PIF2 TRIM29-201ENST00000341846 3328 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
SYCE2Q6PIF2 CDHR1-206ENST00000623527 6781 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
SYCE2Q6PIF2 IL4R-203ENST00000543915 3539 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
SYCE2Q6PIF2 MTR-205ENST00000535889 10405 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
SYCE2Q6PIF2 PKP1-202ENST00000352845 2244 ntTSL 5 BASIC10.72□□□□□ -0.69
SYCE2Q6PIF2 ALDH1L1-AS2-202ENST00000500525 2236 ntTSL 2 BASIC10.72□□□□□ -0.69
SYCE2Q6PIF2 AC010867.1-201ENST00000558038 2289 ntBASIC10.72□□□□□ -0.69
SYCE2Q6PIF2 TACC2-212ENST00000453444 9158 ntTSL 5 BASIC10.72□□□□□ -0.69
SYCE2Q6PIF2 TTC28-201ENST00000397906 11795 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
SYCE2Q6PIF2 LINC00968-201ENST00000499425 2366 ntTSL 2 BASIC10.72□□□□□ -0.69
SYCE2Q6PIF2 CPT1A-206ENST00000540367 2496 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
SYCE2Q6PIF2 SLC22A13-201ENST00000311856 2555 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
SYCE2Q6PIF2 IQANK1-203ENST00000533004 2737 ntTSL 2 BASIC10.71□□□□□ -0.69
SYCE2Q6PIF2 PLD5-208ENST00000536534 8721 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
SYCE2Q6PIF2 N4BP2L1-204ENST00000380139 2994 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
SYCE2Q6PIF2 EIF3CL-202ENST00000398944 3053 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
SYCE2Q6PIF2 SEC23B-203ENST00000377465 3229 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
SYCE2Q6PIF2 POLDIP3-201ENST00000252115 3441 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
SYCE2Q6PIF2 YME1L1-207ENST00000477432 3474 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
SYCE2Q6PIF2 ZNF266-202ENST00000588221 3503 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
SYCE2Q6PIF2 CAMK2G-206ENST00000394762 3767 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
SYCE2Q6PIF2 UHRF1-207ENST00000624301 3898 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
SYCE2Q6PIF2 SRP72-201ENST00000342756 3983 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
SYCE2Q6PIF2 SPECC1-205ENST00000395529 4971 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
SYCE2Q6PIF2 NMNAT2-202ENST00000294868 5448 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
SYCE2Q6PIF2 EPHA5-206ENST00000622150 8421 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
SYCE2Q6PIF2 BICD1-201ENST00000281474 3281 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
SYCE2Q6PIF2 RPL22L1-201ENST00000295830 2190 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
SYCE2Q6PIF2 ZBTB34-201ENST00000319119 6564 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
SYCE2Q6PIF2 C6orf58-201ENST00000329722 1200 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
SYCE2Q6PIF2 SAMD7-201ENST00000335556 2376 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
SYCE2Q6PIF2 DHX15-201ENST00000336812 2994 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
SYCE2Q6PIF2 ACTG2-201ENST00000345517 1530 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
SYCE2Q6PIF2 GBA-202ENST00000368373 2276 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
SYCE2Q6PIF2 EBF3-202ENST00000368648 4375 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
SYCE2Q6PIF2 ITGB1BP2-201ENST00000373829 1296 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
SYCE2Q6PIF2 AL136226.1-201ENST00000401715 802 ntBASIC10.71□□□□□ -0.69
SYCE2Q6PIF2 ZSWIM5P1-201ENST00000420606 1970 ntBASIC10.71□□□□□ -0.69
SYCE2Q6PIF2 SDHAP1-203ENST00000427149 706 ntTSL 5 BASIC10.71□□□□□ -0.69
SYCE2Q6PIF2 SAMD7-202ENST00000428432 2399 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
SYCE2Q6PIF2 HNRNPH3P1-201ENST00000431935 583 ntBASIC10.71□□□□□ -0.69
SYCE2Q6PIF2 AC141930.1-201ENST00000438247 786 ntTSL 4 BASIC10.71□□□□□ -0.69
SYCE2Q6PIF2 COTL1P2-201ENST00000455360 352 ntBASIC10.71□□□□□ -0.69
SYCE2Q6PIF2 AC022294.1-201ENST00000460993 865 ntTSL 3 BASIC10.71□□□□□ -0.69
SYCE2Q6PIF2 AC007318.1-201ENST00000467568 881 ntBASIC10.71□□□□□ -0.69
SYCE2Q6PIF2 C4orf22-205ENST00000508675 753 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
SYCE2Q6PIF2 ZDHHC11B-202ENST00000508859 1631 ntAPPRIS P5 TSL 5 BASIC10.71□□□□□ -0.69
SYCE2Q6PIF2 LECT2-204ENST00000514447 789 ntTSL 2 BASIC10.71□□□□□ -0.69
SYCE2Q6PIF2 IGKV2-14-201ENST00000517571 347 ntBASIC10.71□□□□□ -0.69
SYCE2Q6PIF2 AC025576.2-201ENST00000535806 390 ntTSL 3 BASIC10.71□□□□□ -0.69
SYCE2Q6PIF2 AC023511.1-201ENST00000549055 571 ntTSL 3 BASIC10.71□□□□□ -0.69
SYCE2Q6PIF2 AC130324.1-201ENST00000584157 831 ntTSL 3 BASIC10.71□□□□□ -0.69
SYCE2Q6PIF2 AC090376.1-201ENST00000589845 616 ntTSL 2 BASIC10.71□□□□□ -0.69
SYCE2Q6PIF2 EIF3K-211ENST00000592558 670 ntTSL 2 BASIC10.71□□□□□ -0.69
SYCE2Q6PIF2 AC007228.1-201ENST00000600036 142 ntBASIC10.71□□□□□ -0.69
SYCE2Q6PIF2 uc_338.27-201ENST00000611385 169 ntBASIC10.71□□□□□ -0.69
SYCE2Q6PIF2 TRBV7-9-201ENST00000612787 347 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
SYCE2Q6PIF2 IFITM2-206ENST00000616316 892 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
SYCE2Q6PIF2 MIR6744-201ENST00000619480 66 ntBASIC10.71□□□□□ -0.69
SYCE2Q6PIF2 NOP2-223ENST00000620535 2791 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
SYCE2Q6PIF2 SERPINB11-208ENST00000623262 918 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
SYCE2Q6PIF2 NF1P9-202ENST00000629550 966 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
SYCE2Q6PIF2 PRAMEF13-202ENST00000638454 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
SYCE2Q6PIF2 DMXL2-201ENST00000251076 10672 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.7
SYCE2Q6PIF2 RPL28-201ENST00000344063 4796 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
SYCE2Q6PIF2 CDHR2-206ENST00000510636 4509 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
SYCE2Q6PIF2 RIPOR1-203ENST00000422602 3990 ntAPPRIS ALT2 TSL 2 BASIC10.71□□□□□ -0.7
SYCE2Q6PIF2 RBM19-202ENST00000392561 3574 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
SYCE2Q6PIF2 PLXNB2-213ENST00000610984 3443 ntTSL 5 BASIC10.71□□□□□ -0.7
SYCE2Q6PIF2 IL4R-201ENST00000170630 3380 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.7
SYCE2Q6PIF2 LOXHD1-207ENST00000441551 6226 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.7
SYCE2Q6PIF2 RASGRP4-205ENST00000586305 3061 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
SYCE2Q6PIF2 TCF21-201ENST00000237316 3010 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
SYCE2Q6PIF2 CMC1-205ENST00000466830 6033 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
SYCE2Q6PIF2 LINC01460-201ENST00000379677 2860 ntTSL 2 BASIC10.71□□□□□ -0.7
SYCE2Q6PIF2 BRD4-201ENST00000263377 7169 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
SYCE2Q6PIF2 ABCC11-204ENST00000394748 4576 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
SYCE2Q6PIF2 OR2A14-202ENST00000641068 2199 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
SYCE2Q6PIF2 NXPE1-202ENST00000424269 1896 ntAPPRIS P5 TSL 5 BASIC10.7□□□□□ -0.7
SYCE2Q6PIF2 DEF8-201ENST00000268676 3725 ntTSL 2 BASIC10.7□□□□□ -0.7
SYCE2Q6PIF2 LMO3-215ENST00000537304 1685 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
SYCE2Q6PIF2 AC093802.1-201ENST00000407524 3238 ntTSL 2 BASIC10.7□□□□□ -0.7
SYCE2Q6PIF2 TTLL3-202ENST00000383827 4834 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
SYCE2Q6PIF2 PLEKHM1P1-204ENST00000582201 3166 ntBASIC10.7□□□□□ -0.7
SYCE2Q6PIF2 RPL32P3-205ENST00000507287 1555 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
SYCE2Q6PIF2 CD22-204ENST00000536635 3004 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
SYCE2Q6PIF2 AC020915.6-201ENST00000637233 3042 ntAPPRIS P5 TSL 5 BASIC10.7□□□□□ -0.7
SYCE2Q6PIF2 HIVEP2-203ENST00000367604 10032 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
SYCE2Q6PIF2 ACTBL2-201ENST00000423391 2794 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
SYCE2Q6PIF2 FAM189A2-203ENST00000377216 1385 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
SYCE2Q6PIF2 ANP32E-203ENST00000436748 1339 ntTSL 2 BASIC10.7□□□□□ -0.7
SYCE2Q6PIF2 CACNA1C-212ENST00000399621 6568 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 226.6 ms