Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 TNS1-209ENST00000446688 4292 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
P04436 GNL3L-201ENST00000336470 2357 ntAPPRIS P1 TSL 2 BASIC9.37□□□□□ -0.91
P04436 DERL2-201ENST00000158771 4209 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
P04436 HIST1H2BE-202ENST00000634910 2585 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
P04436 THUMPD3-201ENST00000345094 3961 ntAPPRIS P1 TSL 2 BASIC9.37□□□□□ -0.91
P04436 PKNOX1-203ENST00000432907 5180 ntTSL 2 BASIC9.37□□□□□ -0.91
P04436 AC008040.1-204ENST00000469301 1738 ntTSL 2 BASIC9.37□□□□□ -0.91
P04436 CU633980.1-201ENST00000613894 1708 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
P04436 CCDC36-204ENST00000452691 2315 ntAPPRIS P1 TSL 2 BASIC9.37□□□□□ -0.91
P04436 R3HDM2-205ENST00000403821 3347 ntTSL 5 BASIC9.37□□□□□ -0.91
P04436 KANK1-210ENST00000619269 5688 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
P04436 AC113554.2-201ENST00000577647 4862 ntAPPRIS P1 TSL 2 BASIC9.37□□□□□ -0.91
P04436 PDCD4-202ENST00000393104 3697 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
P04436 OSBP2-204ENST00000407373 3669 ntAPPRIS ALT2 TSL 2 BASIC9.37□□□□□ -0.91
P04436 RSBN1L-203ENST00000445288 2667 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
P04436 ODF2-203ENST00000372807 2475 ntAPPRIS ALT1 TSL 1 (best) BASIC9.37□□□□□ -0.91
P04436 PABPC1P4-201ENST00000539977 1875 ntBASIC9.37□□□□□ -0.91
P04436 ATP1A2-201ENST00000361216 5421 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
P04436 MIR941-2-201ENST00000401322 72 ntBASIC9.37□□□□□ -0.91
P04436 MIR941-4-201ENST00000401376 72 ntBASIC9.37□□□□□ -0.91
P04436 GEMIN6-202ENST00000409011 1210 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
P04436 ANKRD30BL-202ENST00000409867 1251 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
P04436 MIR205HG-203ENST00000429156 990 ntTSL 3 BASIC9.37□□□□□ -0.91
P04436 CICP18-202ENST00000436899 727 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
P04436 C6orf52-204ENST00000460742 541 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
P04436 C5orf66-203ENST00000513931 474 ntTSL 3 BASIC9.37□□□□□ -0.91
P04436 LINC01843-201ENST00000515627 1107 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
P04436 AC245187.1-201ENST00000520162 559 ntTSL 4 BASIC9.37□□□□□ -0.91
P04436 RPL30-209ENST00000521291 575 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
P04436 AC018620.1-201ENST00000523233 379 ntBASIC9.37□□□□□ -0.91
P04436 AC002094.3-201ENST00000555059 851 ntAPPRIS P1 TSL 4 BASIC9.37□□□□□ -0.91
P04436 MPHOSPH6-207ENST00000569021 392 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
P04436 AC024267.5-201ENST00000579154 599 ntBASIC9.37□□□□□ -0.91
P04436 RN7SL391P-201ENST00000582559 284 ntBASIC9.37□□□□□ -0.91
P04436 AC002116.2-201ENST00000586962 643 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
P04436 ZNF429-206ENST00000597078 1043 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
P04436 RN7SL539P-201ENST00000610974 291 ntBASIC9.37□□□□□ -0.91
P04436 RN7SL196P-201ENST00000614361 291 ntBASIC9.37□□□□□ -0.91
P04436 RN7SL286P-201ENST00000616519 291 ntBASIC9.37□□□□□ -0.91
P04436 MIR941-5-201ENST00000621667 72 ntBASIC9.37□□□□□ -0.91
P04436 MIR941-3-201ENST00000637366 72 ntBASIC9.37□□□□□ -0.91
P04436 AC005906.2-214ENST00000640128 1235 ntTSL 5 BASIC9.37□□□□□ -0.91
P04436 MARS2-201ENST00000282276 3019 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
P04436 TRAF3IP2-207ENST00000368761 5128 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
P04436 TMC3-AS1-207ENST00000642113 2043 ntBASIC9.37□□□□□ -0.91
P04436 EPSTI1-202ENST00000313640 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
P04436 DNAJA4-201ENST00000343789 2961 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
P04436 AC099811.6-201ENST00000624554 1638 ntBASIC9.37□□□□□ -0.91
P04436 COL4A6-202ENST00000372216 6570 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
P04436 CLDN19-203ENST00000539749 3517 ntTSL 2 BASIC9.37□□□□□ -0.91
P04436 SMPD4-201ENST00000351288 3661 ntTSL 2 BASIC9.37□□□□□ -0.91
P04436 MAST4-221ENST00000490016 1950 ntTSL 2 BASIC9.37□□□□□ -0.91
P04436 LUC7L3-208ENST00000505658 7040 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
P04436 PRKCQ-202ENST00000397176 3096 ntTSL 5 BASIC9.37□□□□□ -0.91
P04436 AC024257.3-201ENST00000595310 3645 ntBASIC9.37□□□□□ -0.91
P04436 AL645730.1-201ENST00000622945 1901 ntBASIC9.37□□□□□ -0.91
P04436 NLRP1-215ENST00000613500 4494 ntTSL 5 BASIC9.37□□□□□ -0.91
P04436 AK5-202ENST00000344720 3929 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
P04436 GRM3-201ENST00000361669 4268 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
P04436 ZNF608-210ENST00000613878 3190 ntTSL 5 BASIC9.36□□□□□ -0.91
P04436 MPP7-202ENST00000375719 2090 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
P04436 NDRG1-229ENST00000537882 2975 ntTSL 2 BASIC9.36□□□□□ -0.91
P04436 MED24-202ENST00000394126 3896 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
P04436 ESR1-202ENST00000338799 3335 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
P04436 STAU1-201ENST00000340954 3334 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
P04436 SMARCA2-263ENST00000637806 7061 ntTSL 5 BASIC9.36□□□□□ -0.91
P04436 RPL31-201ENST00000264258 1865 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
P04436 GTSE1-201ENST00000454366 3112 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
P04436 TPTE-202ENST00000612746 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
P04436 PAQR7-201ENST00000374296 3297 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
P04436 PSMC1P11-201ENST00000405257 1317 ntBASIC9.36□□□□□ -0.91
P04436 SERPINA10-204ENST00000554723 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
P04436 IL36RN-201ENST00000346807 2672 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
P04436 SNX12-201ENST00000276105 720 ntAPPRIS ALT1 TSL 3 BASIC9.36□□□□□ -0.91
P04436 TMPRSS11E-201ENST00000305363 2136 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
P04436 PRR13-201ENST00000379786 927 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
P04436 FKBP1A-202ENST00000381719 747 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
P04436 SNORD88C-201ENST00000408061 91 ntBASIC9.36□□□□□ -0.91
P04436 LINC01643-201ENST00000412218 757 ntTSL 5 BASIC9.36□□□□□ -0.91
P04436 RNASE1-204ENST00000412779 896 ntAPPRIS P1 TSL 2 BASIC9.36□□□□□ -0.91
P04436 AL031667.2-201ENST00000423903 323 ntBASIC9.36□□□□□ -0.91
P04436 AL139184.1-201ENST00000426579 364 ntTSL 3 BASIC9.36□□□□□ -0.91
P04436 AC024559.1-201ENST00000426616 566 ntTSL 4 BASIC9.36□□□□□ -0.91
P04436 AL358790.1-203ENST00000440461 579 ntTSL 5 BASIC9.36□□□□□ -0.91
P04436 TRBV22OR9-2-201ENST00000441373 136 ntBASIC9.36□□□□□ -0.91
P04436 AL606530.1-201ENST00000441783 1250 ntBASIC9.36□□□□□ -0.91
P04436 AL033527.1-201ENST00000446772 154 ntBASIC9.36□□□□□ -0.91
P04436 AL590396.1-201ENST00000450208 775 ntBASIC9.36□□□□□ -0.91
P04436 TUBBP2-201ENST00000454403 411 ntBASIC9.36□□□□□ -0.91
P04436 AC104212.1-201ENST00000472088 613 ntBASIC9.36□□□□□ -0.91
P04436 RPL7AP57-201ENST00000497708 784 ntBASIC9.36□□□□□ -0.91
P04436 AC245052.6-201ENST00000506567 219 ntBASIC9.36□□□□□ -0.91
P04436 TMEM161B-AS1-207ENST00000506584 717 ntTSL 3 BASIC9.36□□□□□ -0.91
P04436 AC004066.2-201ENST00000514879 572 ntTSL 4 BASIC9.36□□□□□ -0.91
P04436 AC083836.1-201ENST00000519366 2125 ntTSL 5 BASIC9.36□□□□□ -0.91
P04436 OR1D4-202ENST00000531680 642 ntBASIC9.36□□□□□ -0.91
P04436 HPR-202ENST00000540303 1244 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
P04436 PGA5-205ENST00000541528 867 ntTSL 2 BASIC9.36□□□□□ -0.91
P04436 ZNF506-204ENST00000545006 1007 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
P04436 RN7SL819P-201ENST00000581896 270 ntBASIC9.36□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms