Protein–RNA interactions for Protein: Q6PIF2

SYCE2, Synaptonemal complex central element protein 2, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE2Q6PIF2 ZBTB43-202ENST00000373464 5965 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SYCE2Q6PIF2 SLC12A4-204ENST00000541864 3627 ntTSL 2 BASIC10.8□□□□□ -0.68
SYCE2Q6PIF2 FGF21-201ENST00000222157 885 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SYCE2Q6PIF2 CALCA-202ENST00000361010 916 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
SYCE2Q6PIF2 KRTAP13-3-201ENST00000390690 704 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
SYCE2Q6PIF2 WISP3-205ENST00000409166 953 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
SYCE2Q6PIF2 LINC00111-201ENST00000413718 575 ntTSL 3 BASIC10.8□□□□□ -0.68
SYCE2Q6PIF2 AC021016.1-201ENST00000414167 498 ntBASIC10.8□□□□□ -0.68
SYCE2Q6PIF2 Z99716.1-201ENST00000424613 515 ntTSL 5 BASIC10.8□□□□□ -0.68
SYCE2Q6PIF2 LINC01712-201ENST00000446227 1044 ntTSL 5 BASIC10.8□□□□□ -0.68
SYCE2Q6PIF2 BX072579.2-201ENST00000455857 525 ntTSL 2 BASIC10.8□□□□□ -0.68
SYCE2Q6PIF2 RN7SL231P-201ENST00000461840 272 ntBASIC10.8□□□□□ -0.68
SYCE2Q6PIF2 RN7SL567P-201ENST00000462015 303 ntBASIC10.8□□□□□ -0.68
SYCE2Q6PIF2 C5orf64-AS1-201ENST00000506550 1265 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
SYCE2Q6PIF2 AC233724.5-201ENST00000509526 598 ntBASIC10.8□□□□□ -0.68
SYCE2Q6PIF2 TECRP1-201ENST00000513307 445 ntBASIC10.8□□□□□ -0.68
SYCE2Q6PIF2 AC106794.2-201ENST00000513713 632 ntBASIC10.8□□□□□ -0.68
SYCE2Q6PIF2 VN1R46P-201ENST00000519939 850 ntBASIC10.8□□□□□ -0.68
SYCE2Q6PIF2 RPS3-203ENST00000524851 866 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SYCE2Q6PIF2 GLTPP1-201ENST00000528859 622 ntBASIC10.8□□□□□ -0.68
SYCE2Q6PIF2 OR1D4-202ENST00000531680 642 ntBASIC10.8□□□□□ -0.68
SYCE2Q6PIF2 AC124248.1-201ENST00000558221 402 ntTSL 5 BASIC10.8□□□□□ -0.68
SYCE2Q6PIF2 AC051619.5-203ENST00000561404 529 ntTSL 4 BASIC10.8□□□□□ -0.68
SYCE2Q6PIF2 AC010333.2-201ENST00000564505 698 ntTSL 3 BASIC10.8□□□□□ -0.68
SYCE2Q6PIF2 AC024619.3-201ENST00000582196 323 ntTSL 2 BASIC10.8□□□□□ -0.68
SYCE2Q6PIF2 MIR3185-201ENST00000583892 68 ntBASIC10.8□□□□□ -0.68
SYCE2Q6PIF2 AC046185.2-201ENST00000603263 413 ntBASIC10.8□□□□□ -0.68
SYCE2Q6PIF2 AC004004.1-201ENST00000603784 250 ntBASIC10.8□□□□□ -0.68
SYCE2Q6PIF2 TP53TG1-206ENST00000610086 849 ntTSL 3 BASIC10.8□□□□□ -0.68
SYCE2Q6PIF2 TRPC5OS-202ENST00000612026 1043 ntAPPRIS P1 TSL 3 BASIC10.8□□□□□ -0.68
SYCE2Q6PIF2 HOXB13-AS1_2.1-201ENST00000612962 81 ntBASIC10.8□□□□□ -0.68
SYCE2Q6PIF2 ALOX5AP-203ENST00000617770 1224 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
SYCE2Q6PIF2 TNXB-203ENST00000451343 3125 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
SYCE2Q6PIF2 PKD2L2-206ENST00000508883 2282 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
SYCE2Q6PIF2 STRIP1-201ENST00000369795 3265 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SYCE2Q6PIF2 LRTM1-201ENST00000273286 1423 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SYCE2Q6PIF2 AL136982.1-201ENST00000444431 4560 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
SYCE2Q6PIF2 ZFYVE9P1-201ENST00000416133 1724 ntBASIC10.8□□□□□ -0.68
SYCE2Q6PIF2 SNTG1-201ENST00000517473 1703 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
SYCE2Q6PIF2 ITSN1-201ENST00000379960 3026 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
SYCE2Q6PIF2 GALNT17-205ENST00000618959 3012 ntTSL 5 BASIC10.8□□□□□ -0.68
SYCE2Q6PIF2 ANAPC16-201ENST00000299381 3195 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SYCE2Q6PIF2 EFNB2-201ENST00000245323 4461 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SYCE2Q6PIF2 SHROOM2-202ENST00000418909 4615 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
SYCE2Q6PIF2 C3orf20-201ENST00000253697 3326 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
SYCE2Q6PIF2 AMPD2-205ENST00000393688 3217 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
SYCE2Q6PIF2 AC016876.2-201ENST00000581621 4554 ntTSL 2 BASIC10.8□□□□□ -0.68
SYCE2Q6PIF2 USP28-205ENST00000537706 1900 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
SYCE2Q6PIF2 NDST2-207ENST00000639645 2448 ntTSL 5 BASIC10.79□□□□□ -0.68
SYCE2Q6PIF2 AL591742.2-201ENST00000632517 2119 ntBASIC10.79□□□□□ -0.68
SYCE2Q6PIF2 DPPA2-201ENST00000478945 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
SYCE2Q6PIF2 SLC6A2-203ENST00000414754 3201 ntTSL 5 BASIC10.79□□□□□ -0.68
SYCE2Q6PIF2 RPGR-203ENST00000378505 4767 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
SYCE2Q6PIF2 UST-201ENST00000367463 4198 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
SYCE2Q6PIF2 CHEK1-204ENST00000438015 4153 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
SYCE2Q6PIF2 ZNF98-201ENST00000357774 2338 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
SYCE2Q6PIF2 CMKLR1-201ENST00000312143 5283 ntAPPRIS ALT2 TSL 2 BASIC10.79□□□□□ -0.68
SYCE2Q6PIF2 SOGA1-202ENST00000279034 3703 ntAPPRIS P3 TSL 5 BASIC10.79□□□□□ -0.68
SYCE2Q6PIF2 EBF2-201ENST00000408929 1888 ntTSL 2 BASIC10.79□□□□□ -0.68
SYCE2Q6PIF2 APOBEC3C-201ENST00000361441 2818 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
SYCE2Q6PIF2 N6AMT1-201ENST00000303775 4865 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
SYCE2Q6PIF2 MAP3K14-202ENST00000376926 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
SYCE2Q6PIF2 MICU1-201ENST00000361114 2383 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
SYCE2Q6PIF2 PTCH2-203ENST00000447098 4298 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
SYCE2Q6PIF2 PSENEN-201ENST00000222266 603 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
SYCE2Q6PIF2 RPL27-201ENST00000253788 490 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
SYCE2Q6PIF2 DEFA3-201ENST00000327857 498 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
SYCE2Q6PIF2 KIR2DL4-202ENST00000346587 1026 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
SYCE2Q6PIF2 OSCP1-202ENST00000354267 767 ntTSL 5 BASIC10.79□□□□□ -0.68
SYCE2Q6PIF2 ATP5G1-201ENST00000355938 598 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
SYCE2Q6PIF2 RNA5SP298-201ENST00000364991 111 ntBASIC10.79□□□□□ -0.68
SYCE2Q6PIF2 WTAPP1-201ENST00000371455 546 ntTSL 4 BASIC10.79□□□□□ -0.68
SYCE2Q6PIF2 MIR629-201ENST00000385230 97 ntBASIC10.79□□□□□ -0.68
SYCE2Q6PIF2 MIR711-201ENST00000390201 76 ntBASIC10.79□□□□□ -0.68
SYCE2Q6PIF2 RN7SKP65-201ENST00000410278 313 ntBASIC10.79□□□□□ -0.68
SYCE2Q6PIF2 STSP1-201ENST00000412493 1151 ntBASIC10.79□□□□□ -0.68
SYCE2Q6PIF2 AC010422.1-201ENST00000414548 543 ntTSL 2 BASIC10.79□□□□□ -0.68
SYCE2Q6PIF2 AC073551.1-201ENST00000450741 834 ntBASIC10.79□□□□□ -0.68
SYCE2Q6PIF2 AC073288.2-201ENST00000468232 664 ntTSL 3 BASIC10.79□□□□□ -0.68
SYCE2Q6PIF2 AC026415.1-201ENST00000505404 471 ntTSL 5 BASIC10.79□□□□□ -0.68
SYCE2Q6PIF2 AC137810.1-201ENST00000510433 540 ntTSL 4 BASIC10.79□□□□□ -0.68
SYCE2Q6PIF2 AC245187.1-201ENST00000520162 559 ntTSL 4 BASIC10.79□□□□□ -0.68
SYCE2Q6PIF2 AMN1-212ENST00000542781 879 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
SYCE2Q6PIF2 C1RL-211ENST00000545280 449 ntTSL 3 BASIC10.79□□□□□ -0.68
SYCE2Q6PIF2 AL139023.1-201ENST00000548280 508 ntTSL 4 BASIC10.79□□□□□ -0.68
SYCE2Q6PIF2 VN1R67P-201ENST00000568379 913 ntBASIC10.79□□□□□ -0.68
SYCE2Q6PIF2 AC015674.1-201ENST00000578482 267 ntBASIC10.79□□□□□ -0.68
SYCE2Q6PIF2 AC010776.1-201ENST00000588298 542 ntTSL 4 BASIC10.79□□□□□ -0.68
SYCE2Q6PIF2 RPL17P3-201ENST00000605695 525 ntBASIC10.79□□□□□ -0.68
SYCE2Q6PIF2 AC013553.4-201ENST00000619781 622 ntBASIC10.79□□□□□ -0.68
SYCE2Q6PIF2 AK2-214ENST00000626911 160 ntTSL 3 BASIC10.79□□□□□ -0.68
SYCE2Q6PIF2 PMEPA1-201ENST00000265626 4627 ntTSL 3 BASIC10.79□□□□□ -0.68
SYCE2Q6PIF2 CLIP1-219ENST00000620786 5913 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
SYCE2Q6PIF2 ATP9B-201ENST00000307671 3533 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
SYCE2Q6PIF2 CRTAM-203ENST00000533709 1929 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
SYCE2Q6PIF2 SLC11A2-205ENST00000545993 1937 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
SYCE2Q6PIF2 GAS7-201ENST00000323816 8033 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
SYCE2Q6PIF2 GAS7-204ENST00000437099 8003 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
SYCE2Q6PIF2 SLC7A7-204ENST00000397532 2447 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
SYCE2Q6PIF2 HS1BP3-202ENST00000402541 4358 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms