Protein–RNA interactions for Protein: Q9Y5W9

SNX11, Sorting nexin-11, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11Q9Y5W9 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.75■□□□□ 0.91
SNX11Q9Y5W9 AL162412.1-201ENST00000567129 965 ntBASIC20.75■□□□□ 0.91
SNX11Q9Y5W9 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
SNX11Q9Y5W9 AC080038.3-201ENST00000623346 1952 ntBASIC20.75■□□□□ 0.91
SNX11Q9Y5W9 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SNX11Q9Y5W9 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.74■□□□□ 0.91
SNX11Q9Y5W9 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SNX11Q9Y5W9 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.74■□□□□ 0.91
SNX11Q9Y5W9 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.74■□□□□ 0.91
SNX11Q9Y5W9 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SNX11Q9Y5W9 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.74■□□□□ 0.91
SNX11Q9Y5W9 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SNX11Q9Y5W9 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC20.74■□□□□ 0.91
SNX11Q9Y5W9 ADM-205ENST00000528544 586 ntTSL 2 BASIC20.74■□□□□ 0.91
SNX11Q9Y5W9 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SNX11Q9Y5W9 AC061975.6-201ENST00000579045 1553 ntBASIC20.74■□□□□ 0.91
SNX11Q9Y5W9 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.74■□□□□ 0.91
SNX11Q9Y5W9 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SNX11Q9Y5W9 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SNX11Q9Y5W9 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SNX11Q9Y5W9 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
SNX11Q9Y5W9 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SNX11Q9Y5W9 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SNX11Q9Y5W9 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.74■□□□□ 0.91
SNX11Q9Y5W9 AC139530.1-201ENST00000575312 1977 ntBASIC20.74■□□□□ 0.91
SNX11Q9Y5W9 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.73■□□□□ 0.91
SNX11Q9Y5W9 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.73■□□□□ 0.91
SNX11Q9Y5W9 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SNX11Q9Y5W9 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
SNX11Q9Y5W9 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SNX11Q9Y5W9 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
SNX11Q9Y5W9 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.73■□□□□ 0.91
SNX11Q9Y5W9 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SNX11Q9Y5W9 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC20.73■□□□□ 0.91
SNX11Q9Y5W9 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC20.73■□□□□ 0.91
SNX11Q9Y5W9 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.73■□□□□ 0.91
SNX11Q9Y5W9 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.73■□□□□ 0.91
SNX11Q9Y5W9 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SNX11Q9Y5W9 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SNX11Q9Y5W9 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SNX11Q9Y5W9 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
SNX11Q9Y5W9 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SNX11Q9Y5W9 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
SNX11Q9Y5W9 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SNX11Q9Y5W9 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
SNX11Q9Y5W9 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SNX11Q9Y5W9 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
SNX11Q9Y5W9 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC20.72■□□□□ 0.91
SNX11Q9Y5W9 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.72■□□□□ 0.91
SNX11Q9Y5W9 IRX5-204ENST00000560154 879 ntTSL 5 BASIC20.72■□□□□ 0.91
SNX11Q9Y5W9 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SNX11Q9Y5W9 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SNX11Q9Y5W9 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SNX11Q9Y5W9 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SNX11Q9Y5W9 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
SNX11Q9Y5W9 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SNX11Q9Y5W9 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
SNX11Q9Y5W9 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SNX11Q9Y5W9 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.71■□□□□ 0.91
SNX11Q9Y5W9 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SNX11Q9Y5W9 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SNX11Q9Y5W9 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SNX11Q9Y5W9 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SNX11Q9Y5W9 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.71■□□□□ 0.91
SNX11Q9Y5W9 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SNX11Q9Y5W9 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SNX11Q9Y5W9 GAS7-202ENST00000396115 929 ntTSL 5 BASIC20.71■□□□□ 0.91
SNX11Q9Y5W9 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SNX11Q9Y5W9 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.71■□□□□ 0.91
SNX11Q9Y5W9 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.71■□□□□ 0.91
SNX11Q9Y5W9 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.71■□□□□ 0.91
SNX11Q9Y5W9 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC20.71■□□□□ 0.91
SNX11Q9Y5W9 AC243732.1-201ENST00000612648 864 ntBASIC20.71■□□□□ 0.91
SNX11Q9Y5W9 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SNX11Q9Y5W9 AC127496.7-201ENST00000625110 1798 ntBASIC20.71■□□□□ 0.91
SNX11Q9Y5W9 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
SNX11Q9Y5W9 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.71■□□□□ 0.91
SNX11Q9Y5W9 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SNX11Q9Y5W9 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SNX11Q9Y5W9 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.71■□□□□ 0.91
SNX11Q9Y5W9 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SNX11Q9Y5W9 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SNX11Q9Y5W9 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.7■□□□□ 0.91
SNX11Q9Y5W9 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SNX11Q9Y5W9 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SNX11Q9Y5W9 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SNX11Q9Y5W9 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SNX11Q9Y5W9 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SNX11Q9Y5W9 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
SNX11Q9Y5W9 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
SNX11Q9Y5W9 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC20.7■□□□□ 0.9
SNX11Q9Y5W9 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.7■□□□□ 0.9
SNX11Q9Y5W9 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SNX11Q9Y5W9 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
SNX11Q9Y5W9 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
SNX11Q9Y5W9 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SNX11Q9Y5W9 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.7■□□□□ 0.9
SNX11Q9Y5W9 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SNX11Q9Y5W9 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SNX11Q9Y5W9 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms