Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RAI2Q9Y5P3 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC21.16■□□□□ 0.98
RAI2Q9Y5P3 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC21.16■□□□□ 0.98
RAI2Q9Y5P3 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC21.16■□□□□ 0.98
RAI2Q9Y5P3 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC21.16■□□□□ 0.98
RAI2Q9Y5P3 AC073111.5-205ENST00000641717 521 ntBASIC21.16■□□□□ 0.98
RAI2Q9Y5P3 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.16■□□□□ 0.98
RAI2Q9Y5P3 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RAI2Q9Y5P3 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RAI2Q9Y5P3 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RAI2Q9Y5P3 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC21.15■□□□□ 0.98
RAI2Q9Y5P3 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
RAI2Q9Y5P3 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
RAI2Q9Y5P3 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RAI2Q9Y5P3 PARP1-202ENST00000366792 553 ntTSL 3 BASIC21.15■□□□□ 0.98
RAI2Q9Y5P3 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RAI2Q9Y5P3 AC006015.1-201ENST00000429970 570 ntBASIC21.15■□□□□ 0.98
RAI2Q9Y5P3 MAP2K4P1-201ENST00000438453 1195 ntBASIC21.15■□□□□ 0.98
RAI2Q9Y5P3 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RAI2Q9Y5P3 SPI1-203ENST00000533030 661 ntTSL 2 BASIC21.15■□□□□ 0.98
RAI2Q9Y5P3 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC21.15■□□□□ 0.98
RAI2Q9Y5P3 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC21.15■□□□□ 0.98
RAI2Q9Y5P3 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC21.15■□□□□ 0.98
RAI2Q9Y5P3 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC21.15■□□□□ 0.98
RAI2Q9Y5P3 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RAI2Q9Y5P3 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RAI2Q9Y5P3 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.15■□□□□ 0.98
RAI2Q9Y5P3 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
RAI2Q9Y5P3 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RAI2Q9Y5P3 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RAI2Q9Y5P3 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
RAI2Q9Y5P3 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
RAI2Q9Y5P3 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
RAI2Q9Y5P3 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.14■□□□□ 0.98
RAI2Q9Y5P3 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RAI2Q9Y5P3 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
RAI2Q9Y5P3 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC21.14■□□□□ 0.97
RAI2Q9Y5P3 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
RAI2Q9Y5P3 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
RAI2Q9Y5P3 AL355802.2-201ENST00000402069 882 ntBASIC21.14■□□□□ 0.97
RAI2Q9Y5P3 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
RAI2Q9Y5P3 KRT18P11-201ENST00000435214 1283 ntBASIC21.14■□□□□ 0.97
RAI2Q9Y5P3 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC21.14■□□□□ 0.97
RAI2Q9Y5P3 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC21.14■□□□□ 0.97
RAI2Q9Y5P3 PPP1R14BP3-201ENST00000509033 445 ntBASIC21.14■□□□□ 0.97
RAI2Q9Y5P3 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RAI2Q9Y5P3 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RAI2Q9Y5P3 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC21.14■□□□□ 0.97
RAI2Q9Y5P3 TFG-210ENST00000620299 1289 ntTSL 5 BASIC21.14■□□□□ 0.97
RAI2Q9Y5P3 WWOX-218ENST00000627394 894 ntTSL 5 BASIC21.14■□□□□ 0.97
RAI2Q9Y5P3 MYCNOS-205ENST00000641950 531 ntBASIC21.14■□□□□ 0.97
RAI2Q9Y5P3 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RAI2Q9Y5P3 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RAI2Q9Y5P3 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RAI2Q9Y5P3 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
RAI2Q9Y5P3 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
RAI2Q9Y5P3 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC21.13■□□□□ 0.97
RAI2Q9Y5P3 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RAI2Q9Y5P3 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
RAI2Q9Y5P3 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RAI2Q9Y5P3 AC026310.3-201ENST00000625186 2373 ntBASIC21.13■□□□□ 0.97
RAI2Q9Y5P3 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RAI2Q9Y5P3 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
RAI2Q9Y5P3 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
RAI2Q9Y5P3 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC21.13■□□□□ 0.97
RAI2Q9Y5P3 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.13■□□□□ 0.97
RAI2Q9Y5P3 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RAI2Q9Y5P3 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RAI2Q9Y5P3 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.12■□□□□ 0.97
RAI2Q9Y5P3 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.12■□□□□ 0.97
RAI2Q9Y5P3 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
RAI2Q9Y5P3 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
RAI2Q9Y5P3 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RAI2Q9Y5P3 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.12■□□□□ 0.97
RAI2Q9Y5P3 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC21.12■□□□□ 0.97
RAI2Q9Y5P3 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC21.12■□□□□ 0.97
RAI2Q9Y5P3 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RAI2Q9Y5P3 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC21.12■□□□□ 0.97
RAI2Q9Y5P3 SLC7A5P1-201ENST00000568957 537 ntBASIC21.12■□□□□ 0.97
RAI2Q9Y5P3 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC21.12■□□□□ 0.97
RAI2Q9Y5P3 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC21.12■□□□□ 0.97
RAI2Q9Y5P3 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
RAI2Q9Y5P3 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RAI2Q9Y5P3 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
RAI2Q9Y5P3 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RAI2Q9Y5P3 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RAI2Q9Y5P3 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC21.11■□□□□ 0.97
RAI2Q9Y5P3 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RAI2Q9Y5P3 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
RAI2Q9Y5P3 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RAI2Q9Y5P3 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
RAI2Q9Y5P3 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RAI2Q9Y5P3 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RAI2Q9Y5P3 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RAI2Q9Y5P3 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
RAI2Q9Y5P3 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
RAI2Q9Y5P3 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RAI2Q9Y5P3 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC21.11■□□□□ 0.97
RAI2Q9Y5P3 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC21.11■□□□□ 0.97
RAI2Q9Y5P3 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms