Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PCDHGB3Q9Y5G1 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
PCDHGB3Q9Y5G1 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PCDHGB3Q9Y5G1 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PCDHGB3Q9Y5G1 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.77■□□□□ 0.75
PCDHGB3Q9Y5G1 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC19.76■□□□□ 0.75
PCDHGB3Q9Y5G1 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHGB3Q9Y5G1 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.76■□□□□ 0.75
PCDHGB3Q9Y5G1 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHGB3Q9Y5G1 AC003102.1-202ENST00000563394 1796 ntBASIC19.76■□□□□ 0.75
PCDHGB3Q9Y5G1 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHGB3Q9Y5G1 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHGB3Q9Y5G1 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHGB3Q9Y5G1 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHGB3Q9Y5G1 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.76■□□□□ 0.75
PCDHGB3Q9Y5G1 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHGB3Q9Y5G1 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHGB3Q9Y5G1 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.76■□□□□ 0.75
PCDHGB3Q9Y5G1 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHGB3Q9Y5G1 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHGB3Q9Y5G1 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHGB3Q9Y5G1 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.75■□□□□ 0.75
PCDHGB3Q9Y5G1 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
PCDHGB3Q9Y5G1 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHGB3Q9Y5G1 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
PCDHGB3Q9Y5G1 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHGB3Q9Y5G1 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.75■□□□□ 0.75
PCDHGB3Q9Y5G1 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.75■□□□□ 0.75
PCDHGB3Q9Y5G1 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHGB3Q9Y5G1 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.75■□□□□ 0.75
PCDHGB3Q9Y5G1 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHGB3Q9Y5G1 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.75■□□□□ 0.75
PCDHGB3Q9Y5G1 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHGB3Q9Y5G1 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHGB3Q9Y5G1 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC19.75■□□□□ 0.75
PCDHGB3Q9Y5G1 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.75■□□□□ 0.75
PCDHGB3Q9Y5G1 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHGB3Q9Y5G1 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHGB3Q9Y5G1 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.74■□□□□ 0.75
PCDHGB3Q9Y5G1 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.74■□□□□ 0.75
PCDHGB3Q9Y5G1 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHGB3Q9Y5G1 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHGB3Q9Y5G1 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
PCDHGB3Q9Y5G1 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
PCDHGB3Q9Y5G1 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.74■□□□□ 0.75
PCDHGB3Q9Y5G1 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHGB3Q9Y5G1 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHGB3Q9Y5G1 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHGB3Q9Y5G1 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
PCDHGB3Q9Y5G1 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
PCDHGB3Q9Y5G1 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
PCDHGB3Q9Y5G1 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHGB3Q9Y5G1 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
PCDHGB3Q9Y5G1 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHGB3Q9Y5G1 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
PCDHGB3Q9Y5G1 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHGB3Q9Y5G1 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHGB3Q9Y5G1 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.73■□□□□ 0.75
PCDHGB3Q9Y5G1 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
PCDHGB3Q9Y5G1 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
PCDHGB3Q9Y5G1 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.73■□□□□ 0.75
PCDHGB3Q9Y5G1 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHGB3Q9Y5G1 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.73■□□□□ 0.75
PCDHGB3Q9Y5G1 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.73■□□□□ 0.75
PCDHGB3Q9Y5G1 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.73■□□□□ 0.75
PCDHGB3Q9Y5G1 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.73■□□□□ 0.75
PCDHGB3Q9Y5G1 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC19.73■□□□□ 0.75
PCDHGB3Q9Y5G1 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHGB3Q9Y5G1 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHGB3Q9Y5G1 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
PCDHGB3Q9Y5G1 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.73■□□□□ 0.75
PCDHGB3Q9Y5G1 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHGB3Q9Y5G1 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHGB3Q9Y5G1 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHGB3Q9Y5G1 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.72■□□□□ 0.75
PCDHGB3Q9Y5G1 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHGB3Q9Y5G1 LINC02228-203ENST00000641970 1355 ntBASIC19.72■□□□□ 0.75
PCDHGB3Q9Y5G1 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHGB3Q9Y5G1 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHGB3Q9Y5G1 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
PCDHGB3Q9Y5G1 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHGB3Q9Y5G1 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHGB3Q9Y5G1 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.72■□□□□ 0.75
PCDHGB3Q9Y5G1 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHGB3Q9Y5G1 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC19.72■□□□□ 0.75
PCDHGB3Q9Y5G1 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
PCDHGB3Q9Y5G1 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHGB3Q9Y5G1 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHGB3Q9Y5G1 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.72■□□□□ 0.75
PCDHGB3Q9Y5G1 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHGB3Q9Y5G1 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHGB3Q9Y5G1 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHGB3Q9Y5G1 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.71■□□□□ 0.75
PCDHGB3Q9Y5G1 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
PCDHGB3Q9Y5G1 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHGB3Q9Y5G1 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
PCDHGB3Q9Y5G1 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHGB3Q9Y5G1 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
PCDHGB3Q9Y5G1 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHGB3Q9Y5G1 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms