Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.14■□□□□ 0.97
PCDHGC4Q9Y5F7 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC21.13■□□□□ 0.97
PCDHGC4Q9Y5F7 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.13■□□□□ 0.97
PCDHGC4Q9Y5F7 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHGC4Q9Y5F7 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHGC4Q9Y5F7 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
PCDHGC4Q9Y5F7 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHGC4Q9Y5F7 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHGC4Q9Y5F7 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC21.13■□□□□ 0.97
PCDHGC4Q9Y5F7 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC21.13■□□□□ 0.97
PCDHGC4Q9Y5F7 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC21.13■□□□□ 0.97
PCDHGC4Q9Y5F7 BRI3-207ENST00000539286 699 ntTSL 2 BASIC21.13■□□□□ 0.97
PCDHGC4Q9Y5F7 SLC7A5P1-201ENST00000568957 537 ntBASIC21.13■□□□□ 0.97
PCDHGC4Q9Y5F7 MFSD11-216ENST00000590393 1141 ntBASIC21.13■□□□□ 0.97
PCDHGC4Q9Y5F7 BID-214ENST00000617586 542 ntTSL 5 BASIC21.13■□□□□ 0.97
PCDHGC4Q9Y5F7 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHGC4Q9Y5F7 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
PCDHGC4Q9Y5F7 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHGC4Q9Y5F7 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
PCDHGC4Q9Y5F7 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHGC4Q9Y5F7 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHGC4Q9Y5F7 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHGC4Q9Y5F7 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHGC4Q9Y5F7 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC21.12■□□□□ 0.97
PCDHGC4Q9Y5F7 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHGC4Q9Y5F7 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC21.12■□□□□ 0.97
PCDHGC4Q9Y5F7 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC21.12■□□□□ 0.97
PCDHGC4Q9Y5F7 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC21.12■□□□□ 0.97
PCDHGC4Q9Y5F7 AL024507.2-201ENST00000606070 2574 ntBASIC21.12■□□□□ 0.97
PCDHGC4Q9Y5F7 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHGC4Q9Y5F7 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHGC4Q9Y5F7 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHGC4Q9Y5F7 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHGC4Q9Y5F7 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHGC4Q9Y5F7 AC007375.3-201ENST00000600936 2314 ntBASIC21.11■□□□□ 0.97
PCDHGC4Q9Y5F7 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHGC4Q9Y5F7 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHGC4Q9Y5F7 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHGC4Q9Y5F7 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHGC4Q9Y5F7 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHGC4Q9Y5F7 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHGC4Q9Y5F7 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
PCDHGC4Q9Y5F7 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHGC4Q9Y5F7 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
PCDHGC4Q9Y5F7 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHGC4Q9Y5F7 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHGC4Q9Y5F7 DLX3-202ENST00000512495 834 ntTSL 2 BASIC21.11■□□□□ 0.97
PCDHGC4Q9Y5F7 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHGC4Q9Y5F7 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHGC4Q9Y5F7 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC21.11■□□□□ 0.97
PCDHGC4Q9Y5F7 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC21.11■□□□□ 0.97
PCDHGC4Q9Y5F7 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHGC4Q9Y5F7 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHGC4Q9Y5F7 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHGC4Q9Y5F7 GAS2L1P2-201ENST00000436355 1356 ntBASIC21.1■□□□□ 0.97
PCDHGC4Q9Y5F7 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHGC4Q9Y5F7 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHGC4Q9Y5F7 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHGC4Q9Y5F7 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC21.1■□□□□ 0.97
PCDHGC4Q9Y5F7 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC21.1■□□□□ 0.97
PCDHGC4Q9Y5F7 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC21.1■□□□□ 0.97
PCDHGC4Q9Y5F7 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC21.1■□□□□ 0.97
PCDHGC4Q9Y5F7 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHGC4Q9Y5F7 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.1■□□□□ 0.97
PCDHGC4Q9Y5F7 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHGC4Q9Y5F7 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
PCDHGC4Q9Y5F7 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHGC4Q9Y5F7 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHGC4Q9Y5F7 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
PCDHGC4Q9Y5F7 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
PCDHGC4Q9Y5F7 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHGC4Q9Y5F7 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.09■□□□□ 0.97
PCDHGC4Q9Y5F7 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC21.09■□□□□ 0.97
PCDHGC4Q9Y5F7 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC21.09■□□□□ 0.97
PCDHGC4Q9Y5F7 AF106564.1-201ENST00000607058 2553 ntBASIC21.09■□□□□ 0.97
PCDHGC4Q9Y5F7 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHGC4Q9Y5F7 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC21.09■□□□□ 0.97
PCDHGC4Q9Y5F7 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHGC4Q9Y5F7 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHGC4Q9Y5F7 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHGC4Q9Y5F7 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC21.09■□□□□ 0.97
PCDHGC4Q9Y5F7 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC21.09■□□□□ 0.97
PCDHGC4Q9Y5F7 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC21.09■□□□□ 0.97
PCDHGC4Q9Y5F7 AC080038.1-201ENST00000611274 1154 ntBASIC21.09■□□□□ 0.97
PCDHGC4Q9Y5F7 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
PCDHGC4Q9Y5F7 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHGC4Q9Y5F7 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHGC4Q9Y5F7 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC21.09■□□□□ 0.97
PCDHGC4Q9Y5F7 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
PCDHGC4Q9Y5F7 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
PCDHGC4Q9Y5F7 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PCDHGC4Q9Y5F7 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PCDHGC4Q9Y5F7 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PCDHGC4Q9Y5F7 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.97
PCDHGC4Q9Y5F7 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC21.08■□□□□ 0.97
PCDHGC4Q9Y5F7 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
PCDHGC4Q9Y5F7 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.08■□□□□ 0.97
PCDHGC4Q9Y5F7 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
PCDHGC4Q9Y5F7 VPS53-216ENST00000574029 585 ntTSL 4 BASIC21.08■□□□□ 0.97
PCDHGC4Q9Y5F7 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC21.08■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms