Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC24.17■■□□□ 1.46
CTDP1Q9Y5B0 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC24.17■■□□□ 1.46
CTDP1Q9Y5B0 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC24.17■■□□□ 1.46
CTDP1Q9Y5B0 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC24.17■■□□□ 1.46
CTDP1Q9Y5B0 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC24.17■■□□□ 1.46
CTDP1Q9Y5B0 TBCB-214ENST00000629269 413 ntTSL 5 BASIC24.17■■□□□ 1.46
CTDP1Q9Y5B0 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC24.17■■□□□ 1.46
CTDP1Q9Y5B0 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC24.17■■□□□ 1.46
CTDP1Q9Y5B0 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
CTDP1Q9Y5B0 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
CTDP1Q9Y5B0 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
CTDP1Q9Y5B0 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
CTDP1Q9Y5B0 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
CTDP1Q9Y5B0 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC24.16■■□□□ 1.46
CTDP1Q9Y5B0 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC24.16■■□□□ 1.46
CTDP1Q9Y5B0 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
CTDP1Q9Y5B0 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC24.16■■□□□ 1.46
CTDP1Q9Y5B0 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC24.16■■□□□ 1.46
CTDP1Q9Y5B0 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
CTDP1Q9Y5B0 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC24.16■■□□□ 1.46
CTDP1Q9Y5B0 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
CTDP1Q9Y5B0 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC24.16■■□□□ 1.46
CTDP1Q9Y5B0 RNA5SP413-201ENST00000516373 109 ntBASIC24.16■■□□□ 1.46
CTDP1Q9Y5B0 CD44-222ENST00000526025 1052 ntTSL 2 BASIC24.16■■□□□ 1.46
CTDP1Q9Y5B0 AC092118.2-201ENST00000613495 667 ntBASIC24.16■■□□□ 1.46
CTDP1Q9Y5B0 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC24.16■■□□□ 1.46
CTDP1Q9Y5B0 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
CTDP1Q9Y5B0 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CTDP1Q9Y5B0 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC24.16■■□□□ 1.46
CTDP1Q9Y5B0 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CTDP1Q9Y5B0 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CTDP1Q9Y5B0 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
CTDP1Q9Y5B0 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
CTDP1Q9Y5B0 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CTDP1Q9Y5B0 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC24.15■■□□□ 1.46
CTDP1Q9Y5B0 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
CTDP1Q9Y5B0 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
CTDP1Q9Y5B0 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC24.15■■□□□ 1.46
CTDP1Q9Y5B0 CDV3P1-201ENST00000471403 739 ntBASIC24.15■■□□□ 1.46
CTDP1Q9Y5B0 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC24.15■■□□□ 1.46
CTDP1Q9Y5B0 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CTDP1Q9Y5B0 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC24.15■■□□□ 1.46
CTDP1Q9Y5B0 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CTDP1Q9Y5B0 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CTDP1Q9Y5B0 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC24.15■■□□□ 1.46
CTDP1Q9Y5B0 C11orf96-202ENST00000528572 1834 ntBASIC24.14■■□□□ 1.46
CTDP1Q9Y5B0 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.46
CTDP1Q9Y5B0 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
CTDP1Q9Y5B0 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.45
CTDP1Q9Y5B0 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC24.14■■□□□ 1.45
CTDP1Q9Y5B0 AC010980.2-201ENST00000587099 1412 ntBASIC24.14■■□□□ 1.45
CTDP1Q9Y5B0 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC24.14■■□□□ 1.45
CTDP1Q9Y5B0 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC24.14■■□□□ 1.45
CTDP1Q9Y5B0 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
CTDP1Q9Y5B0 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
CTDP1Q9Y5B0 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
CTDP1Q9Y5B0 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC24.13■■□□□ 1.45
CTDP1Q9Y5B0 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
CTDP1Q9Y5B0 AC097658.1-201ENST00000475555 843 ntBASIC24.13■■□□□ 1.45
CTDP1Q9Y5B0 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC24.13■■□□□ 1.45
CTDP1Q9Y5B0 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC24.13■■□□□ 1.45
CTDP1Q9Y5B0 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC24.12■■□□□ 1.45
CTDP1Q9Y5B0 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC24.12■■□□□ 1.45
CTDP1Q9Y5B0 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
CTDP1Q9Y5B0 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC24.12■■□□□ 1.45
CTDP1Q9Y5B0 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
CTDP1Q9Y5B0 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC24.12■■□□□ 1.45
CTDP1Q9Y5B0 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC24.12■■□□□ 1.45
CTDP1Q9Y5B0 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC24.12■■□□□ 1.45
CTDP1Q9Y5B0 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
CTDP1Q9Y5B0 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
CTDP1Q9Y5B0 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
CTDP1Q9Y5B0 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC24.12■■□□□ 1.45
CTDP1Q9Y5B0 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC24.12■■□□□ 1.45
CTDP1Q9Y5B0 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC24.12■■□□□ 1.45
CTDP1Q9Y5B0 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC24.12■■□□□ 1.45
CTDP1Q9Y5B0 SERPINH1P1-201ENST00000419794 1249 ntBASIC24.12■■□□□ 1.45
CTDP1Q9Y5B0 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC24.12■■□□□ 1.45
CTDP1Q9Y5B0 MIR4651-201ENST00000582622 73 ntBASIC24.12■■□□□ 1.45
CTDP1Q9Y5B0 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
CTDP1Q9Y5B0 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC24.12■■□□□ 1.45
CTDP1Q9Y5B0 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC24.12■■□□□ 1.45
CTDP1Q9Y5B0 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC24.12■■□□□ 1.45
CTDP1Q9Y5B0 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC24.12■■□□□ 1.45
CTDP1Q9Y5B0 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC24.12■■□□□ 1.45
CTDP1Q9Y5B0 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC24.12■■□□□ 1.45
CTDP1Q9Y5B0 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
CTDP1Q9Y5B0 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
CTDP1Q9Y5B0 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
CTDP1Q9Y5B0 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
CTDP1Q9Y5B0 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
CTDP1Q9Y5B0 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC24.11■■□□□ 1.45
CTDP1Q9Y5B0 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
CTDP1Q9Y5B0 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC24.11■■□□□ 1.45
CTDP1Q9Y5B0 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC24.11■■□□□ 1.45
CTDP1Q9Y5B0 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC24.11■■□□□ 1.45
CTDP1Q9Y5B0 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC24.11■■□□□ 1.45
CTDP1Q9Y5B0 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC24.11■■□□□ 1.45
CTDP1Q9Y5B0 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
CTDP1Q9Y5B0 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC24.1■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms