Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 GOLGA2P6-201ENST00000340929 2049 ntBASIC14.34□□□□□ -0.11
LINC00588Q9Y4M8 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC14.34□□□□□ -0.11
LINC00588Q9Y4M8 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC14.34□□□□□ -0.11
LINC00588Q9Y4M8 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC00588Q9Y4M8 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC00588Q9Y4M8 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC14.34□□□□□ -0.11
LINC00588Q9Y4M8 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC00588Q9Y4M8 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
LINC00588Q9Y4M8 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
LINC00588Q9Y4M8 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC14.34□□□□□ -0.11
LINC00588Q9Y4M8 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
LINC00588Q9Y4M8 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC00588Q9Y4M8 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC14.34□□□□□ -0.11
LINC00588Q9Y4M8 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC00588Q9Y4M8 APTR-205ENST00000447009 902 ntTSL 2 BASIC14.34□□□□□ -0.11
LINC00588Q9Y4M8 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC14.34□□□□□ -0.11
LINC00588Q9Y4M8 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LINC00588Q9Y4M8 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LINC00588Q9Y4M8 MKRN4P-201ENST00000444706 1521 ntBASIC14.34□□□□□ -0.11
LINC00588Q9Y4M8 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LINC00588Q9Y4M8 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC00588Q9Y4M8 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LINC00588Q9Y4M8 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LINC00588Q9Y4M8 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC00588Q9Y4M8 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
LINC00588Q9Y4M8 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
LINC00588Q9Y4M8 AL117328.2-201ENST00000624617 1940 ntBASIC14.33□□□□□ -0.11
LINC00588Q9Y4M8 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
LINC00588Q9Y4M8 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
LINC00588Q9Y4M8 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC14.33□□□□□ -0.11
LINC00588Q9Y4M8 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LINC00588Q9Y4M8 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
LINC00588Q9Y4M8 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC14.33□□□□□ -0.12
LINC00588Q9Y4M8 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LINC00588Q9Y4M8 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
LINC00588Q9Y4M8 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LINC00588Q9Y4M8 AC093787.1-201ENST00000450396 207 ntBASIC14.33□□□□□ -0.12
LINC00588Q9Y4M8 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LINC00588Q9Y4M8 CD44-222ENST00000526025 1052 ntTSL 2 BASIC14.33□□□□□ -0.12
LINC00588Q9Y4M8 PHB2-213ENST00000546111 858 ntTSL 2 BASIC14.33□□□□□ -0.12
LINC00588Q9Y4M8 AL162412.1-201ENST00000567129 965 ntBASIC14.33□□□□□ -0.12
LINC00588Q9Y4M8 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC14.33□□□□□ -0.12
LINC00588Q9Y4M8 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC14.33□□□□□ -0.12
LINC00588Q9Y4M8 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC14.33□□□□□ -0.12
LINC00588Q9Y4M8 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LINC00588Q9Y4M8 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LINC00588Q9Y4M8 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
LINC00588Q9Y4M8 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
LINC00588Q9Y4M8 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC14.33□□□□□ -0.12
LINC00588Q9Y4M8 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
LINC00588Q9Y4M8 AC012676.1-201ENST00000574705 1949 ntBASIC14.33□□□□□ -0.12
LINC00588Q9Y4M8 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LINC00588Q9Y4M8 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC00588Q9Y4M8 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC00588Q9Y4M8 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC00588Q9Y4M8 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
LINC00588Q9Y4M8 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
LINC00588Q9Y4M8 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC00588Q9Y4M8 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC14.32□□□□□ -0.12
LINC00588Q9Y4M8 AL512625.2-201ENST00000417533 625 ntBASIC14.32□□□□□ -0.12
LINC00588Q9Y4M8 PBX1-209ENST00000485769 834 ntTSL 2 BASIC14.32□□□□□ -0.12
LINC00588Q9Y4M8 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC14.32□□□□□ -0.12
LINC00588Q9Y4M8 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC14.32□□□□□ -0.12
LINC00588Q9Y4M8 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC14.32□□□□□ -0.12
LINC00588Q9Y4M8 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC14.32□□□□□ -0.12
LINC00588Q9Y4M8 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC14.32□□□□□ -0.12
LINC00588Q9Y4M8 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC00588Q9Y4M8 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC00588Q9Y4M8 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
LINC00588Q9Y4M8 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC00588Q9Y4M8 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC00588Q9Y4M8 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
LINC00588Q9Y4M8 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
LINC00588Q9Y4M8 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC00588Q9Y4M8 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC00588Q9Y4M8 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LINC00588Q9Y4M8 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC00588Q9Y4M8 AC091799.1-201ENST00000422823 811 ntBASIC14.31□□□□□ -0.12
LINC00588Q9Y4M8 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC00588Q9Y4M8 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC00588Q9Y4M8 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC14.31□□□□□ -0.12
LINC00588Q9Y4M8 RARRES2P4-201ENST00000514074 484 ntBASIC14.31□□□□□ -0.12
LINC00588Q9Y4M8 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC14.31□□□□□ -0.12
LINC00588Q9Y4M8 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC14.31□□□□□ -0.12
LINC00588Q9Y4M8 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC14.31□□□□□ -0.12
LINC00588Q9Y4M8 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC14.31□□□□□ -0.12
LINC00588Q9Y4M8 MARS-234ENST00000630571 216 ntTSL 5 BASIC14.31□□□□□ -0.12
LINC00588Q9Y4M8 MARS-235ENST00000630803 183 ntTSL 3 BASIC14.31□□□□□ -0.12
LINC00588Q9Y4M8 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC00588Q9Y4M8 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC00588Q9Y4M8 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC00588Q9Y4M8 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LINC00588Q9Y4M8 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC00588Q9Y4M8 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LINC00588Q9Y4M8 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LINC00588Q9Y4M8 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC14.3□□□□□ -0.12
LINC00588Q9Y4M8 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LINC00588Q9Y4M8 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
LINC00588Q9Y4M8 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC14.3□□□□□ -0.12
LINC00588Q9Y4M8 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms