Protein–RNA interactions for Protein: Q9UQN3

CHMP2B, Charged multivesicular body protein 2b, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2BQ9UQN3 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CHMP2BQ9UQN3 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CHMP2BQ9UQN3 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC21.24■□□□□ 0.99
CHMP2BQ9UQN3 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CHMP2BQ9UQN3 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CHMP2BQ9UQN3 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CHMP2BQ9UQN3 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CHMP2BQ9UQN3 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC21.24■□□□□ 0.99
CHMP2BQ9UQN3 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
CHMP2BQ9UQN3 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CHMP2BQ9UQN3 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CHMP2BQ9UQN3 AC055733.4-201ENST00000638462 1354 ntBASIC21.23■□□□□ 0.99
CHMP2BQ9UQN3 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CHMP2BQ9UQN3 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CHMP2BQ9UQN3 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
CHMP2BQ9UQN3 AC009237.3-201ENST00000393279 1427 ntBASIC21.23■□□□□ 0.99
CHMP2BQ9UQN3 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CHMP2BQ9UQN3 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC21.23■□□□□ 0.99
CHMP2BQ9UQN3 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
CHMP2BQ9UQN3 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
CHMP2BQ9UQN3 AC008764.7-201ENST00000593779 1081 ntBASIC21.23■□□□□ 0.99
CHMP2BQ9UQN3 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CHMP2BQ9UQN3 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
CHMP2BQ9UQN3 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CHMP2BQ9UQN3 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CHMP2BQ9UQN3 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CHMP2BQ9UQN3 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CHMP2BQ9UQN3 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CHMP2BQ9UQN3 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CHMP2BQ9UQN3 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CHMP2BQ9UQN3 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CHMP2BQ9UQN3 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
CHMP2BQ9UQN3 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC21.22■□□□□ 0.99
CHMP2BQ9UQN3 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CHMP2BQ9UQN3 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC21.22■□□□□ 0.99
CHMP2BQ9UQN3 AC131212.1-201ENST00000613771 668 ntBASIC21.22■□□□□ 0.99
CHMP2BQ9UQN3 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
CHMP2BQ9UQN3 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CHMP2BQ9UQN3 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CHMP2BQ9UQN3 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CHMP2BQ9UQN3 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC21.21■□□□□ 0.99
CHMP2BQ9UQN3 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
CHMP2BQ9UQN3 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
CHMP2BQ9UQN3 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CHMP2BQ9UQN3 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CHMP2BQ9UQN3 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CHMP2BQ9UQN3 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC21.21■□□□□ 0.99
CHMP2BQ9UQN3 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
CHMP2BQ9UQN3 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CHMP2BQ9UQN3 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC21.21■□□□□ 0.99
CHMP2BQ9UQN3 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CHMP2BQ9UQN3 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC21.21■□□□□ 0.99
CHMP2BQ9UQN3 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC21.21■□□□□ 0.99
CHMP2BQ9UQN3 AICDA-202ENST00000537228 667 ntTSL 5 BASIC21.21■□□□□ 0.99
CHMP2BQ9UQN3 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
CHMP2BQ9UQN3 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CHMP2BQ9UQN3 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CHMP2BQ9UQN3 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC21.21■□□□□ 0.99
CHMP2BQ9UQN3 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
CHMP2BQ9UQN3 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
CHMP2BQ9UQN3 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CHMP2BQ9UQN3 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CHMP2BQ9UQN3 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
CHMP2BQ9UQN3 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC21.2■□□□□ 0.99
CHMP2BQ9UQN3 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHMP2BQ9UQN3 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
CHMP2BQ9UQN3 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHMP2BQ9UQN3 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHMP2BQ9UQN3 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHMP2BQ9UQN3 AC099791.1-201ENST00000416440 715 ntBASIC21.2■□□□□ 0.98
CHMP2BQ9UQN3 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC21.2■□□□□ 0.98
CHMP2BQ9UQN3 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC21.2■□□□□ 0.98
CHMP2BQ9UQN3 AC105233.4-201ENST00000642045 216 ntBASIC21.2■□□□□ 0.98
CHMP2BQ9UQN3 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHMP2BQ9UQN3 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
CHMP2BQ9UQN3 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHMP2BQ9UQN3 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CHMP2BQ9UQN3 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHMP2BQ9UQN3 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHMP2BQ9UQN3 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC21.2■□□□□ 0.98
CHMP2BQ9UQN3 AC073314.1-201ENST00000568729 2216 ntBASIC21.2■□□□□ 0.98
CHMP2BQ9UQN3 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHMP2BQ9UQN3 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC21.2■□□□□ 0.98
CHMP2BQ9UQN3 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHMP2BQ9UQN3 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHMP2BQ9UQN3 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHMP2BQ9UQN3 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC21.2■□□□□ 0.98
CHMP2BQ9UQN3 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHMP2BQ9UQN3 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CHMP2BQ9UQN3 ERF-202ENST00000440177 2032 ntTSL 2 BASIC21.19■□□□□ 0.98
CHMP2BQ9UQN3 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC21.19■□□□□ 0.98
CHMP2BQ9UQN3 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
CHMP2BQ9UQN3 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CHMP2BQ9UQN3 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC21.19■□□□□ 0.98
CHMP2BQ9UQN3 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC21.19■□□□□ 0.98
CHMP2BQ9UQN3 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
CHMP2BQ9UQN3 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC21.19■□□□□ 0.98
CHMP2BQ9UQN3 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC21.19■□□□□ 0.98
CHMP2BQ9UQN3 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
CHMP2BQ9UQN3 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms