Protein–RNA interactions for Protein: Q9UQD0

SCN8A, Sodium channel protein type 8 subunit alpha, humanhuman

Predictions only

Length 1,980 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8AQ9UQD0 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SCN8AQ9UQD0 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SCN8AQ9UQD0 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SCN8AQ9UQD0 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.81■□□□□ 0.92
SCN8AQ9UQD0 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.81■□□□□ 0.92
SCN8AQ9UQD0 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.81■□□□□ 0.92
SCN8AQ9UQD0 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SCN8AQ9UQD0 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.81■□□□□ 0.92
SCN8AQ9UQD0 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.81■□□□□ 0.92
SCN8AQ9UQD0 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SCN8AQ9UQD0 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SCN8AQ9UQD0 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.8■□□□□ 0.92
SCN8AQ9UQD0 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SCN8AQ9UQD0 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
SCN8AQ9UQD0 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
SCN8AQ9UQD0 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SCN8AQ9UQD0 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SCN8AQ9UQD0 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
SCN8AQ9UQD0 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.8■□□□□ 0.92
SCN8AQ9UQD0 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SCN8AQ9UQD0 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SCN8AQ9UQD0 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.8■□□□□ 0.92
SCN8AQ9UQD0 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SCN8AQ9UQD0 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SCN8AQ9UQD0 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SCN8AQ9UQD0 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.8■□□□□ 0.92
SCN8AQ9UQD0 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SCN8AQ9UQD0 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SCN8AQ9UQD0 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.79■□□□□ 0.92
SCN8AQ9UQD0 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.79■□□□□ 0.92
SCN8AQ9UQD0 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
SCN8AQ9UQD0 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SCN8AQ9UQD0 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.79■□□□□ 0.92
SCN8AQ9UQD0 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.79■□□□□ 0.92
SCN8AQ9UQD0 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
SCN8AQ9UQD0 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.79■□□□□ 0.92
SCN8AQ9UQD0 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
SCN8AQ9UQD0 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
SCN8AQ9UQD0 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SCN8AQ9UQD0 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.79■□□□□ 0.92
SCN8AQ9UQD0 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.79■□□□□ 0.92
SCN8AQ9UQD0 ABHD17AP1-201ENST00000358206 933 ntBASIC20.79■□□□□ 0.92
SCN8AQ9UQD0 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.79■□□□□ 0.92
SCN8AQ9UQD0 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.79■□□□□ 0.92
SCN8AQ9UQD0 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.79■□□□□ 0.92
SCN8AQ9UQD0 AC013268.1-206ENST00000638368 961 ntBASIC20.79■□□□□ 0.92
SCN8AQ9UQD0 AC112229.1-201ENST00000639295 961 ntBASIC20.79■□□□□ 0.92
SCN8AQ9UQD0 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.78■□□□□ 0.92
SCN8AQ9UQD0 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SCN8AQ9UQD0 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SCN8AQ9UQD0 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SCN8AQ9UQD0 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
SCN8AQ9UQD0 AC007322.4-201ENST00000509611 723 ntBASIC20.78■□□□□ 0.92
SCN8AQ9UQD0 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SCN8AQ9UQD0 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SCN8AQ9UQD0 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.78■□□□□ 0.92
SCN8AQ9UQD0 AC010536.3-201ENST00000620306 533 ntBASIC20.78■□□□□ 0.92
SCN8AQ9UQD0 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SCN8AQ9UQD0 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.78■□□□□ 0.92
SCN8AQ9UQD0 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
SCN8AQ9UQD0 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
SCN8AQ9UQD0 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
SCN8AQ9UQD0 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
SCN8AQ9UQD0 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.78■□□□□ 0.92
SCN8AQ9UQD0 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SCN8AQ9UQD0 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC20.77■□□□□ 0.92
SCN8AQ9UQD0 AC120498.10-201ENST00000621827 505 ntBASIC20.77■□□□□ 0.92
SCN8AQ9UQD0 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.77■□□□□ 0.92
SCN8AQ9UQD0 AL355802.2-201ENST00000402069 882 ntBASIC20.77■□□□□ 0.92
SCN8AQ9UQD0 CYP2T1P-201ENST00000432607 1285 ntBASIC20.77■□□□□ 0.92
SCN8AQ9UQD0 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SCN8AQ9UQD0 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.76■□□□□ 0.91
SCN8AQ9UQD0 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
SCN8AQ9UQD0 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SCN8AQ9UQD0 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
SCN8AQ9UQD0 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SCN8AQ9UQD0 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
SCN8AQ9UQD0 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
SCN8AQ9UQD0 NCF1B-203ENST00000435988 1254 ntBASIC20.76■□□□□ 0.91
SCN8AQ9UQD0 AC243732.1-201ENST00000612648 864 ntBASIC20.76■□□□□ 0.91
SCN8AQ9UQD0 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.76■□□□□ 0.91
SCN8AQ9UQD0 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.76■□□□□ 0.91
SCN8AQ9UQD0 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SCN8AQ9UQD0 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.76■□□□□ 0.91
SCN8AQ9UQD0 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.76■□□□□ 0.91
SCN8AQ9UQD0 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
SCN8AQ9UQD0 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.76■□□□□ 0.91
SCN8AQ9UQD0 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SCN8AQ9UQD0 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SCN8AQ9UQD0 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
SCN8AQ9UQD0 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
SCN8AQ9UQD0 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
SCN8AQ9UQD0 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.76■□□□□ 0.91
SCN8AQ9UQD0 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.76■□□□□ 0.91
SCN8AQ9UQD0 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
SCN8AQ9UQD0 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC20.76■□□□□ 0.91
SCN8AQ9UQD0 AL050303.2-201ENST00000619798 666 ntBASIC20.76■□□□□ 0.91
SCN8AQ9UQD0 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SCN8AQ9UQD0 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.75■□□□□ 0.91
SCN8AQ9UQD0 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms