Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
COL20A1Q9P218 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
COL20A1Q9P218 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC23.78■■□□□ 1.4
COL20A1Q9P218 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
COL20A1Q9P218 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC23.78■■□□□ 1.4
COL20A1Q9P218 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
COL20A1Q9P218 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
COL20A1Q9P218 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
COL20A1Q9P218 BX276092.2-201ENST00000417668 665 ntBASIC23.78■■□□□ 1.4
COL20A1Q9P218 AC245052.3-201ENST00000450182 901 ntBASIC23.78■■□□□ 1.4
COL20A1Q9P218 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC23.78■■□□□ 1.4
COL20A1Q9P218 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC23.78■■□□□ 1.4
COL20A1Q9P218 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
COL20A1Q9P218 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
COL20A1Q9P218 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
COL20A1Q9P218 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
COL20A1Q9P218 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
COL20A1Q9P218 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
COL20A1Q9P218 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
COL20A1Q9P218 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC23.77■■□□□ 1.4
COL20A1Q9P218 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
COL20A1Q9P218 MFF-203ENST00000349901 1716 ntTSL 2 BASIC23.77■■□□□ 1.4
COL20A1Q9P218 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
COL20A1Q9P218 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
COL20A1Q9P218 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
COL20A1Q9P218 MIR4758-201ENST00000577688 71 ntBASIC23.77■■□□□ 1.4
COL20A1Q9P218 MIR4651-201ENST00000582622 73 ntBASIC23.77■■□□□ 1.4
COL20A1Q9P218 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC23.77■■□□□ 1.4
COL20A1Q9P218 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
COL20A1Q9P218 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
COL20A1Q9P218 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
COL20A1Q9P218 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
COL20A1Q9P218 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
COL20A1Q9P218 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
COL20A1Q9P218 MYB-221ENST00000527615 2381 ntTSL 5 BASIC23.76■■□□□ 1.39
COL20A1Q9P218 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
COL20A1Q9P218 AC092118.2-201ENST00000613495 667 ntBASIC23.76■■□□□ 1.39
COL20A1Q9P218 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC23.76■■□□□ 1.39
COL20A1Q9P218 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
COL20A1Q9P218 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC23.76■■□□□ 1.39
COL20A1Q9P218 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC23.76■■□□□ 1.39
COL20A1Q9P218 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
COL20A1Q9P218 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
COL20A1Q9P218 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC23.76■■□□□ 1.39
COL20A1Q9P218 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC23.76■■□□□ 1.39
COL20A1Q9P218 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
COL20A1Q9P218 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC23.75■■□□□ 1.39
COL20A1Q9P218 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
COL20A1Q9P218 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
COL20A1Q9P218 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC23.75■■□□□ 1.39
COL20A1Q9P218 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC23.75■■□□□ 1.39
COL20A1Q9P218 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
COL20A1Q9P218 PBX1-209ENST00000485769 834 ntTSL 2 BASIC23.75■■□□□ 1.39
COL20A1Q9P218 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC23.75■■□□□ 1.39
COL20A1Q9P218 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
COL20A1Q9P218 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
COL20A1Q9P218 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
COL20A1Q9P218 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC23.75■■□□□ 1.39
COL20A1Q9P218 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
COL20A1Q9P218 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
COL20A1Q9P218 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
COL20A1Q9P218 AL117328.2-201ENST00000624617 1940 ntBASIC23.74■■□□□ 1.39
COL20A1Q9P218 EP400NL-214ENST00000641289 2402 ntBASIC23.74■■□□□ 1.39
COL20A1Q9P218 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
COL20A1Q9P218 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
COL20A1Q9P218 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
COL20A1Q9P218 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC23.74■■□□□ 1.39
COL20A1Q9P218 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC23.74■■□□□ 1.39
COL20A1Q9P218 TSPY20P-201ENST00000450910 630 ntBASIC23.74■■□□□ 1.39
COL20A1Q9P218 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
COL20A1Q9P218 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
COL20A1Q9P218 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
COL20A1Q9P218 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
COL20A1Q9P218 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
COL20A1Q9P218 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
COL20A1Q9P218 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC23.73■■□□□ 1.39
COL20A1Q9P218 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC23.73■■□□□ 1.39
COL20A1Q9P218 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC23.73■■□□□ 1.39
COL20A1Q9P218 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
COL20A1Q9P218 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
COL20A1Q9P218 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC23.73■■□□□ 1.39
COL20A1Q9P218 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC23.73■■□□□ 1.39
COL20A1Q9P218 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
COL20A1Q9P218 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
COL20A1Q9P218 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
COL20A1Q9P218 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
COL20A1Q9P218 AL355472.2-201ENST00000422958 438 ntBASIC23.72■■□□□ 1.39
COL20A1Q9P218 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC23.72■■□□□ 1.39
COL20A1Q9P218 ISCU-212ENST00000547005 795 ntTSL 3 BASIC23.72■■□□□ 1.39
COL20A1Q9P218 AC083880.1-201ENST00000608266 535 ntBASIC23.72■■□□□ 1.39
COL20A1Q9P218 FAM21FP-204ENST00000608637 956 ntBASIC23.72■■□□□ 1.39
COL20A1Q9P218 MYC-209ENST00000641252 345 ntBASIC23.72■■□□□ 1.39
COL20A1Q9P218 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
COL20A1Q9P218 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
COL20A1Q9P218 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
COL20A1Q9P218 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
COL20A1Q9P218 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
COL20A1Q9P218 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
COL20A1Q9P218 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
COL20A1Q9P218 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms