Protein–RNA interactions for Protein: Q9P000

COMMD9, COMM domain-containing protein 9, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9Q9P000 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
COMMD9Q9P000 AC104564.3-201ENST00000582367 638 ntBASIC17.73■□□□□ 0.43
COMMD9Q9P000 CA15P2-201ENST00000611168 834 ntBASIC17.73■□□□□ 0.43
COMMD9Q9P000 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COMMD9Q9P000 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC17.73■□□□□ 0.43
COMMD9Q9P000 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC17.73■□□□□ 0.43
COMMD9Q9P000 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC17.73■□□□□ 0.43
COMMD9Q9P000 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
COMMD9Q9P000 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COMMD9Q9P000 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
COMMD9Q9P000 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
COMMD9Q9P000 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC17.72■□□□□ 0.43
COMMD9Q9P000 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
COMMD9Q9P000 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
COMMD9Q9P000 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
COMMD9Q9P000 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.72■□□□□ 0.43
COMMD9Q9P000 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
COMMD9Q9P000 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
COMMD9Q9P000 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
COMMD9Q9P000 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC17.72■□□□□ 0.43
COMMD9Q9P000 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
COMMD9Q9P000 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
COMMD9Q9P000 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
COMMD9Q9P000 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
COMMD9Q9P000 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC17.72■□□□□ 0.43
COMMD9Q9P000 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC17.72■□□□□ 0.43
COMMD9Q9P000 EXOG-217ENST00000630638 197 ntTSL 5 BASIC17.72■□□□□ 0.43
COMMD9Q9P000 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
COMMD9Q9P000 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC17.72■□□□□ 0.43
COMMD9Q9P000 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
COMMD9Q9P000 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
COMMD9Q9P000 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
COMMD9Q9P000 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC17.72■□□□□ 0.43
COMMD9Q9P000 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
COMMD9Q9P000 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
COMMD9Q9P000 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
COMMD9Q9P000 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC17.72■□□□□ 0.43
COMMD9Q9P000 AC004687.1-201ENST00000579003 1625 ntBASIC17.72■□□□□ 0.43
COMMD9Q9P000 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC17.72■□□□□ 0.43
COMMD9Q9P000 C17orf82-201ENST00000623772 1530 ntBASIC17.72■□□□□ 0.43
COMMD9Q9P000 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
COMMD9Q9P000 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
COMMD9Q9P000 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
COMMD9Q9P000 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC17.71■□□□□ 0.43
COMMD9Q9P000 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
COMMD9Q9P000 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC17.71■□□□□ 0.43
COMMD9Q9P000 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
COMMD9Q9P000 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
COMMD9Q9P000 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
COMMD9Q9P000 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
COMMD9Q9P000 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
COMMD9Q9P000 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
COMMD9Q9P000 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
COMMD9Q9P000 MIR4787-201ENST00000607364 84 ntBASIC17.71■□□□□ 0.43
COMMD9Q9P000 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC17.71■□□□□ 0.43
COMMD9Q9P000 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.71■□□□□ 0.43
COMMD9Q9P000 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
COMMD9Q9P000 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
COMMD9Q9P000 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
COMMD9Q9P000 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
COMMD9Q9P000 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC17.7■□□□□ 0.42
COMMD9Q9P000 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.7■□□□□ 0.42
COMMD9Q9P000 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
COMMD9Q9P000 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
COMMD9Q9P000 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
COMMD9Q9P000 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
COMMD9Q9P000 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
COMMD9Q9P000 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
COMMD9Q9P000 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
COMMD9Q9P000 GABARAPL3-202ENST00000624044 1851 ntBASIC17.7■□□□□ 0.42
COMMD9Q9P000 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
COMMD9Q9P000 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC17.7■□□□□ 0.42
COMMD9Q9P000 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
COMMD9Q9P000 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
COMMD9Q9P000 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC17.7■□□□□ 0.42
COMMD9Q9P000 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC17.7■□□□□ 0.42
COMMD9Q9P000 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
COMMD9Q9P000 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
COMMD9Q9P000 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
COMMD9Q9P000 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
COMMD9Q9P000 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
COMMD9Q9P000 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC17.69■□□□□ 0.42
COMMD9Q9P000 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
COMMD9Q9P000 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
COMMD9Q9P000 VGF-203ENST00000611537 1622 ntTSL 5 BASIC17.69■□□□□ 0.42
COMMD9Q9P000 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
COMMD9Q9P000 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
COMMD9Q9P000 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
COMMD9Q9P000 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC17.69■□□□□ 0.42
COMMD9Q9P000 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC17.69■□□□□ 0.42
COMMD9Q9P000 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC17.69■□□□□ 0.42
COMMD9Q9P000 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
COMMD9Q9P000 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC17.69■□□□□ 0.42
COMMD9Q9P000 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
COMMD9Q9P000 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
COMMD9Q9P000 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
COMMD9Q9P000 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC17.69■□□□□ 0.42
COMMD9Q9P000 AC010997.5-201ENST00000609182 354 ntBASIC17.69■□□□□ 0.42
COMMD9Q9P000 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
COMMD9Q9P000 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms