Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.23■□□□□ 0.67
UBQLN4Q9NRR5 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
UBQLN4Q9NRR5 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
UBQLN4Q9NRR5 AF106564.1-201ENST00000607058 2553 ntBASIC19.23■□□□□ 0.67
UBQLN4Q9NRR5 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
UBQLN4Q9NRR5 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
UBQLN4Q9NRR5 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.23■□□□□ 0.67
UBQLN4Q9NRR5 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.23■□□□□ 0.67
UBQLN4Q9NRR5 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.23■□□□□ 0.67
UBQLN4Q9NRR5 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.23■□□□□ 0.67
UBQLN4Q9NRR5 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.23■□□□□ 0.67
UBQLN4Q9NRR5 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
UBQLN4Q9NRR5 AC005229.4-201ENST00000610085 2198 ntBASIC19.23■□□□□ 0.67
UBQLN4Q9NRR5 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
UBQLN4Q9NRR5 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
UBQLN4Q9NRR5 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
UBQLN4Q9NRR5 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
UBQLN4Q9NRR5 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
UBQLN4Q9NRR5 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
UBQLN4Q9NRR5 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
UBQLN4Q9NRR5 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
UBQLN4Q9NRR5 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
UBQLN4Q9NRR5 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
UBQLN4Q9NRR5 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
UBQLN4Q9NRR5 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.22■□□□□ 0.67
UBQLN4Q9NRR5 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
UBQLN4Q9NRR5 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
UBQLN4Q9NRR5 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
UBQLN4Q9NRR5 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
UBQLN4Q9NRR5 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
UBQLN4Q9NRR5 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19.22■□□□□ 0.67
UBQLN4Q9NRR5 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
UBQLN4Q9NRR5 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.22■□□□□ 0.67
UBQLN4Q9NRR5 MIR5787-201ENST00000611784 55 ntBASIC19.22■□□□□ 0.67
UBQLN4Q9NRR5 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
UBQLN4Q9NRR5 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
UBQLN4Q9NRR5 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
UBQLN4Q9NRR5 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
UBQLN4Q9NRR5 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
UBQLN4Q9NRR5 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
UBQLN4Q9NRR5 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
UBQLN4Q9NRR5 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
UBQLN4Q9NRR5 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.21■□□□□ 0.67
UBQLN4Q9NRR5 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
UBQLN4Q9NRR5 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
UBQLN4Q9NRR5 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.21■□□□□ 0.67
UBQLN4Q9NRR5 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
UBQLN4Q9NRR5 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
UBQLN4Q9NRR5 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
UBQLN4Q9NRR5 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
UBQLN4Q9NRR5 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
UBQLN4Q9NRR5 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
UBQLN4Q9NRR5 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
UBQLN4Q9NRR5 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
UBQLN4Q9NRR5 KRT18P61-201ENST00000585825 1298 ntBASIC19.21■□□□□ 0.67
UBQLN4Q9NRR5 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
UBQLN4Q9NRR5 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.2■□□□□ 0.66
UBQLN4Q9NRR5 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
UBQLN4Q9NRR5 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
UBQLN4Q9NRR5 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
UBQLN4Q9NRR5 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
UBQLN4Q9NRR5 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.2■□□□□ 0.66
UBQLN4Q9NRR5 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
UBQLN4Q9NRR5 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.2■□□□□ 0.66
UBQLN4Q9NRR5 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
UBQLN4Q9NRR5 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
UBQLN4Q9NRR5 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
UBQLN4Q9NRR5 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
UBQLN4Q9NRR5 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
UBQLN4Q9NRR5 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC19.19■□□□□ 0.66
UBQLN4Q9NRR5 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
UBQLN4Q9NRR5 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
UBQLN4Q9NRR5 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
UBQLN4Q9NRR5 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC19.19■□□□□ 0.66
UBQLN4Q9NRR5 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.19■□□□□ 0.66
UBQLN4Q9NRR5 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.19■□□□□ 0.66
UBQLN4Q9NRR5 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.19■□□□□ 0.66
UBQLN4Q9NRR5 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.19■□□□□ 0.66
UBQLN4Q9NRR5 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
UBQLN4Q9NRR5 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
UBQLN4Q9NRR5 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
UBQLN4Q9NRR5 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
UBQLN4Q9NRR5 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
UBQLN4Q9NRR5 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
UBQLN4Q9NRR5 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBQLN4Q9NRR5 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.18■□□□□ 0.66
UBQLN4Q9NRR5 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.18■□□□□ 0.66
UBQLN4Q9NRR5 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.18■□□□□ 0.66
UBQLN4Q9NRR5 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBQLN4Q9NRR5 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.18■□□□□ 0.66
UBQLN4Q9NRR5 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
UBQLN4Q9NRR5 KRT18P5-201ENST00000436075 1291 ntBASIC19.18■□□□□ 0.66
UBQLN4Q9NRR5 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.18■□□□□ 0.66
UBQLN4Q9NRR5 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBQLN4Q9NRR5 SLC7A5P2-201ENST00000553010 536 ntBASIC19.18■□□□□ 0.66
UBQLN4Q9NRR5 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.18■□□□□ 0.66
UBQLN4Q9NRR5 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBQLN4Q9NRR5 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.18■□□□□ 0.66
UBQLN4Q9NRR5 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBQLN4Q9NRR5 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms