Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HINT3Q9NQE9 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
HINT3Q9NQE9 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
HINT3Q9NQE9 AC073314.1-201ENST00000568729 2216 ntBASIC18.85■□□□□ 0.61
HINT3Q9NQE9 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HINT3Q9NQE9 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.85■□□□□ 0.61
HINT3Q9NQE9 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
HINT3Q9NQE9 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
HINT3Q9NQE9 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC18.85■□□□□ 0.61
HINT3Q9NQE9 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC18.85■□□□□ 0.61
HINT3Q9NQE9 SMUG1P1-201ENST00000590640 811 ntBASIC18.85■□□□□ 0.61
HINT3Q9NQE9 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC18.85■□□□□ 0.61
HINT3Q9NQE9 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HINT3Q9NQE9 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.85■□□□□ 0.61
HINT3Q9NQE9 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.85■□□□□ 0.61
HINT3Q9NQE9 GABARAPL3-202ENST00000624044 1851 ntBASIC18.85■□□□□ 0.61
HINT3Q9NQE9 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HINT3Q9NQE9 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HINT3Q9NQE9 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HINT3Q9NQE9 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC18.84■□□□□ 0.61
HINT3Q9NQE9 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HINT3Q9NQE9 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
HINT3Q9NQE9 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HINT3Q9NQE9 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
HINT3Q9NQE9 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
HINT3Q9NQE9 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HINT3Q9NQE9 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC18.84■□□□□ 0.61
HINT3Q9NQE9 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
HINT3Q9NQE9 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HINT3Q9NQE9 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC18.84■□□□□ 0.61
HINT3Q9NQE9 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC18.84■□□□□ 0.61
HINT3Q9NQE9 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC18.84■□□□□ 0.61
HINT3Q9NQE9 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
HINT3Q9NQE9 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC18.84■□□□□ 0.61
HINT3Q9NQE9 AC126544.1-201ENST00000580842 1059 ntBASIC18.84■□□□□ 0.61
HINT3Q9NQE9 MPST-208ENST00000628507 698 ntTSL 5 BASIC18.84■□□□□ 0.61
HINT3Q9NQE9 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
HINT3Q9NQE9 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HINT3Q9NQE9 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
HINT3Q9NQE9 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HINT3Q9NQE9 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
HINT3Q9NQE9 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
HINT3Q9NQE9 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
HINT3Q9NQE9 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC18.83■□□□□ 0.61
HINT3Q9NQE9 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
HINT3Q9NQE9 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
HINT3Q9NQE9 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
HINT3Q9NQE9 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
HINT3Q9NQE9 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
HINT3Q9NQE9 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
HINT3Q9NQE9 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
HINT3Q9NQE9 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
HINT3Q9NQE9 GRAMD4P2-201ENST00000423297 1097 ntBASIC18.83■□□□□ 0.6
HINT3Q9NQE9 AC105265.2-201ENST00000467189 838 ntBASIC18.83■□□□□ 0.6
HINT3Q9NQE9 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
HINT3Q9NQE9 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC18.83■□□□□ 0.6
HINT3Q9NQE9 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC18.83■□□□□ 0.6
HINT3Q9NQE9 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.83■□□□□ 0.6
HINT3Q9NQE9 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.83■□□□□ 0.6
HINT3Q9NQE9 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HINT3Q9NQE9 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HINT3Q9NQE9 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.83■□□□□ 0.6
HINT3Q9NQE9 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HINT3Q9NQE9 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HINT3Q9NQE9 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
HINT3Q9NQE9 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HINT3Q9NQE9 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
HINT3Q9NQE9 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
HINT3Q9NQE9 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
HINT3Q9NQE9 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HINT3Q9NQE9 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.82■□□□□ 0.6
HINT3Q9NQE9 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HINT3Q9NQE9 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HINT3Q9NQE9 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
HINT3Q9NQE9 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC18.82■□□□□ 0.6
HINT3Q9NQE9 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC18.82■□□□□ 0.6
HINT3Q9NQE9 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC18.82■□□□□ 0.6
HINT3Q9NQE9 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
HINT3Q9NQE9 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HINT3Q9NQE9 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
HINT3Q9NQE9 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HINT3Q9NQE9 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HINT3Q9NQE9 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
HINT3Q9NQE9 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC18.82■□□□□ 0.6
HINT3Q9NQE9 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HINT3Q9NQE9 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
HINT3Q9NQE9 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC18.81■□□□□ 0.6
HINT3Q9NQE9 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
HINT3Q9NQE9 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
HINT3Q9NQE9 PXK-203ENST00000383715 1756 ntTSL 5 BASIC18.81■□□□□ 0.6
HINT3Q9NQE9 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.81■□□□□ 0.6
HINT3Q9NQE9 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.81■□□□□ 0.6
HINT3Q9NQE9 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.81■□□□□ 0.6
HINT3Q9NQE9 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HINT3Q9NQE9 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HINT3Q9NQE9 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HINT3Q9NQE9 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
HINT3Q9NQE9 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
HINT3Q9NQE9 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HINT3Q9NQE9 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms