Protein–RNA interactions for Protein: Q9H3Q1

CDC42EP4, Cdc42 effector protein 4, humanhuman

Known RBP Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4Q9H3Q1 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC21.27■■□□□ 1
CDC42EP4Q9H3Q1 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
CDC42EP4Q9H3Q1 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC21.27■■□□□ 1
CDC42EP4Q9H3Q1 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC21.27■■□□□ 1
CDC42EP4Q9H3Q1 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC21.27■■□□□ 1
CDC42EP4Q9H3Q1 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC21.27■■□□□ 1
CDC42EP4Q9H3Q1 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
CDC42EP4Q9H3Q1 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CDC42EP4Q9H3Q1 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC21.27■■□□□ 1
CDC42EP4Q9H3Q1 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC21.27■■□□□ 1
CDC42EP4Q9H3Q1 AC136469.2-201ENST00000623944 1028 ntBASIC21.27■■□□□ 1
CDC42EP4Q9H3Q1 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC21.27■■□□□ 1
CDC42EP4Q9H3Q1 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CDC42EP4Q9H3Q1 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CDC42EP4Q9H3Q1 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CDC42EP4Q9H3Q1 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC21.27■■□□□ 1
CDC42EP4Q9H3Q1 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
CDC42EP4Q9H3Q1 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDC42EP4Q9H3Q1 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDC42EP4Q9H3Q1 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDC42EP4Q9H3Q1 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC21.26■□□□□ 0.99
CDC42EP4Q9H3Q1 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC21.26■□□□□ 0.99
CDC42EP4Q9H3Q1 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDC42EP4Q9H3Q1 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
CDC42EP4Q9H3Q1 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC21.26■□□□□ 0.99
CDC42EP4Q9H3Q1 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC21.26■□□□□ 0.99
CDC42EP4Q9H3Q1 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC21.26■□□□□ 0.99
CDC42EP4Q9H3Q1 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC21.26■□□□□ 0.99
CDC42EP4Q9H3Q1 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC21.26■□□□□ 0.99
CDC42EP4Q9H3Q1 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CDC42EP4Q9H3Q1 SYT6-210ENST00000641643 1587 ntBASIC21.26■□□□□ 0.99
CDC42EP4Q9H3Q1 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CDC42EP4Q9H3Q1 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDC42EP4Q9H3Q1 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDC42EP4Q9H3Q1 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
CDC42EP4Q9H3Q1 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC21.25■□□□□ 0.99
CDC42EP4Q9H3Q1 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDC42EP4Q9H3Q1 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC21.25■□□□□ 0.99
CDC42EP4Q9H3Q1 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CDC42EP4Q9H3Q1 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDC42EP4Q9H3Q1 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC21.25■□□□□ 0.99
CDC42EP4Q9H3Q1 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC21.25■□□□□ 0.99
CDC42EP4Q9H3Q1 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CDC42EP4Q9H3Q1 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CDC42EP4Q9H3Q1 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDC42EP4Q9H3Q1 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDC42EP4Q9H3Q1 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDC42EP4Q9H3Q1 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDC42EP4Q9H3Q1 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
CDC42EP4Q9H3Q1 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDC42EP4Q9H3Q1 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
CDC42EP4Q9H3Q1 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
CDC42EP4Q9H3Q1 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDC42EP4Q9H3Q1 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
CDC42EP4Q9H3Q1 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
CDC42EP4Q9H3Q1 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDC42EP4Q9H3Q1 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC21.24■□□□□ 0.99
CDC42EP4Q9H3Q1 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CDC42EP4Q9H3Q1 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CDC42EP4Q9H3Q1 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC21.24■□□□□ 0.99
CDC42EP4Q9H3Q1 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC21.24■□□□□ 0.99
CDC42EP4Q9H3Q1 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC21.24■□□□□ 0.99
CDC42EP4Q9H3Q1 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CDC42EP4Q9H3Q1 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDC42EP4Q9H3Q1 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDC42EP4Q9H3Q1 BID-203ENST00000399765 1879 ntTSL 2 BASIC21.24■□□□□ 0.99
CDC42EP4Q9H3Q1 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC21.24■□□□□ 0.99
CDC42EP4Q9H3Q1 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
CDC42EP4Q9H3Q1 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDC42EP4Q9H3Q1 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC21.23■□□□□ 0.99
CDC42EP4Q9H3Q1 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CDC42EP4Q9H3Q1 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CDC42EP4Q9H3Q1 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CDC42EP4Q9H3Q1 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CDC42EP4Q9H3Q1 GRAMD4P7-201ENST00000578182 1232 ntBASIC21.23■□□□□ 0.99
CDC42EP4Q9H3Q1 SMUG1P1-201ENST00000590640 811 ntBASIC21.23■□□□□ 0.99
CDC42EP4Q9H3Q1 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CDC42EP4Q9H3Q1 DET1-207ENST00000564406 2315 ntTSL 2 BASIC21.23■□□□□ 0.99
CDC42EP4Q9H3Q1 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC21.23■□□□□ 0.99
CDC42EP4Q9H3Q1 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CDC42EP4Q9H3Q1 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CDC42EP4Q9H3Q1 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CDC42EP4Q9H3Q1 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC21.22■□□□□ 0.99
CDC42EP4Q9H3Q1 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
CDC42EP4Q9H3Q1 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CDC42EP4Q9H3Q1 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDC42EP4Q9H3Q1 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDC42EP4Q9H3Q1 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDC42EP4Q9H3Q1 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC21.22■□□□□ 0.99
CDC42EP4Q9H3Q1 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDC42EP4Q9H3Q1 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC21.22■□□□□ 0.99
CDC42EP4Q9H3Q1 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC21.22■□□□□ 0.99
CDC42EP4Q9H3Q1 AC011298.3-201ENST00000615796 283 ntBASIC21.22■□□□□ 0.99
CDC42EP4Q9H3Q1 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDC42EP4Q9H3Q1 PXK-203ENST00000383715 1756 ntTSL 5 BASIC21.22■□□□□ 0.99
CDC42EP4Q9H3Q1 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC21.22■□□□□ 0.99
CDC42EP4Q9H3Q1 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
CDC42EP4Q9H3Q1 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
CDC42EP4Q9H3Q1 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDC42EP4Q9H3Q1 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms