Protein–RNA interactions for Protein: Q9H3P2

NELFA, Negative elongation factor A, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFAQ9H3P2 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NELFAQ9H3P2 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NELFAQ9H3P2 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NELFAQ9H3P2 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC18.61■□□□□ 0.57
NELFAQ9H3P2 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NELFAQ9H3P2 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
NELFAQ9H3P2 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NELFAQ9H3P2 EEF1DP3-203ENST00000566025 782 ntBASIC18.61■□□□□ 0.57
NELFAQ9H3P2 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC18.61■□□□□ 0.57
NELFAQ9H3P2 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC18.61■□□□□ 0.57
NELFAQ9H3P2 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NELFAQ9H3P2 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NELFAQ9H3P2 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NELFAQ9H3P2 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NELFAQ9H3P2 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
NELFAQ9H3P2 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NELFAQ9H3P2 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NELFAQ9H3P2 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NELFAQ9H3P2 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NELFAQ9H3P2 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NELFAQ9H3P2 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NELFAQ9H3P2 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.6■□□□□ 0.57
NELFAQ9H3P2 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.6■□□□□ 0.57
NELFAQ9H3P2 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
NELFAQ9H3P2 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NELFAQ9H3P2 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
NELFAQ9H3P2 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NELFAQ9H3P2 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC18.6■□□□□ 0.57
NELFAQ9H3P2 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.6■□□□□ 0.57
NELFAQ9H3P2 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
NELFAQ9H3P2 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC18.6■□□□□ 0.57
NELFAQ9H3P2 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC18.6■□□□□ 0.57
NELFAQ9H3P2 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC18.6■□□□□ 0.57
NELFAQ9H3P2 GALNS-213ENST00000569433 723 ntTSL 3 BASIC18.6■□□□□ 0.57
NELFAQ9H3P2 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NELFAQ9H3P2 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC18.6■□□□□ 0.57
NELFAQ9H3P2 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NELFAQ9H3P2 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NELFAQ9H3P2 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NELFAQ9H3P2 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NELFAQ9H3P2 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NELFAQ9H3P2 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NELFAQ9H3P2 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
NELFAQ9H3P2 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
NELFAQ9H3P2 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.59■□□□□ 0.57
NELFAQ9H3P2 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NELFAQ9H3P2 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC18.59■□□□□ 0.57
NELFAQ9H3P2 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC18.59■□□□□ 0.57
NELFAQ9H3P2 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC18.59■□□□□ 0.57
NELFAQ9H3P2 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NELFAQ9H3P2 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
NELFAQ9H3P2 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NELFAQ9H3P2 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
NELFAQ9H3P2 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.59■□□□□ 0.57
NELFAQ9H3P2 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NELFAQ9H3P2 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
NELFAQ9H3P2 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NELFAQ9H3P2 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
NELFAQ9H3P2 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC18.58■□□□□ 0.57
NELFAQ9H3P2 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
NELFAQ9H3P2 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
NELFAQ9H3P2 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
NELFAQ9H3P2 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
NELFAQ9H3P2 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.58■□□□□ 0.57
NELFAQ9H3P2 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
NELFAQ9H3P2 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
NELFAQ9H3P2 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
NELFAQ9H3P2 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
NELFAQ9H3P2 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
NELFAQ9H3P2 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NELFAQ9H3P2 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC18.58■□□□□ 0.56
NELFAQ9H3P2 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC18.58■□□□□ 0.56
NELFAQ9H3P2 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC18.58■□□□□ 0.56
NELFAQ9H3P2 AC104187.1-201ENST00000607510 612 ntBASIC18.58■□□□□ 0.56
NELFAQ9H3P2 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NELFAQ9H3P2 FEM1AP4-201ENST00000443167 1987 ntBASIC18.58■□□□□ 0.56
NELFAQ9H3P2 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
NELFAQ9H3P2 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
NELFAQ9H3P2 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NELFAQ9H3P2 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
NELFAQ9H3P2 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NELFAQ9H3P2 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
NELFAQ9H3P2 AL137060.1-201ENST00000618151 2648 ntBASIC18.57■□□□□ 0.56
NELFAQ9H3P2 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC18.57■□□□□ 0.56
NELFAQ9H3P2 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NELFAQ9H3P2 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
NELFAQ9H3P2 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
NELFAQ9H3P2 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NELFAQ9H3P2 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC18.57■□□□□ 0.56
NELFAQ9H3P2 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
NELFAQ9H3P2 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC18.57■□□□□ 0.56
NELFAQ9H3P2 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
NELFAQ9H3P2 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC18.57■□□□□ 0.56
NELFAQ9H3P2 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
NELFAQ9H3P2 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
NELFAQ9H3P2 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NELFAQ9H3P2 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NELFAQ9H3P2 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NELFAQ9H3P2 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
NELFAQ9H3P2 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms