Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 CD44-222ENST00000526025 1052 ntTSL 2 BASIC21.74■■□□□ 1.07
RNF38Q9H0F5 KRT18P6-201ENST00000555540 1265 ntBASIC21.74■■□□□ 1.07
RNF38Q9H0F5 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
RNF38Q9H0F5 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RNF38Q9H0F5 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RNF38Q9H0F5 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
RNF38Q9H0F5 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.73■■□□□ 1.07
RNF38Q9H0F5 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RNF38Q9H0F5 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC21.73■■□□□ 1.07
RNF38Q9H0F5 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC21.73■■□□□ 1.07
RNF38Q9H0F5 RARRES2P4-201ENST00000514074 484 ntBASIC21.73■■□□□ 1.07
RNF38Q9H0F5 CD99P1-205ENST00000527459 561 ntBASIC21.73■■□□□ 1.07
RNF38Q9H0F5 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC21.73■■□□□ 1.07
RNF38Q9H0F5 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
RNF38Q9H0F5 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
RNF38Q9H0F5 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RNF38Q9H0F5 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RNF38Q9H0F5 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
RNF38Q9H0F5 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RNF38Q9H0F5 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RNF38Q9H0F5 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RNF38Q9H0F5 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RNF38Q9H0F5 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RNF38Q9H0F5 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RNF38Q9H0F5 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
RNF38Q9H0F5 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
RNF38Q9H0F5 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RNF38Q9H0F5 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RNF38Q9H0F5 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RNF38Q9H0F5 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RNF38Q9H0F5 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RNF38Q9H0F5 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
RNF38Q9H0F5 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC21.72■■□□□ 1.07
RNF38Q9H0F5 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC21.72■■□□□ 1.07
RNF38Q9H0F5 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC21.72■■□□□ 1.07
RNF38Q9H0F5 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC21.72■■□□□ 1.07
RNF38Q9H0F5 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC21.72■■□□□ 1.07
RNF38Q9H0F5 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RNF38Q9H0F5 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
RNF38Q9H0F5 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RNF38Q9H0F5 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RNF38Q9H0F5 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RNF38Q9H0F5 AC010980.2-201ENST00000587099 1412 ntBASIC21.72■■□□□ 1.07
RNF38Q9H0F5 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RNF38Q9H0F5 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
RNF38Q9H0F5 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
RNF38Q9H0F5 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RNF38Q9H0F5 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
RNF38Q9H0F5 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC21.71■■□□□ 1.07
RNF38Q9H0F5 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC21.71■■□□□ 1.07
RNF38Q9H0F5 MIR4758-201ENST00000577688 71 ntBASIC21.71■■□□□ 1.07
RNF38Q9H0F5 GOLGA2P6-201ENST00000340929 2049 ntBASIC21.71■■□□□ 1.07
RNF38Q9H0F5 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC21.71■■□□□ 1.07
RNF38Q9H0F5 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RNF38Q9H0F5 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
RNF38Q9H0F5 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RNF38Q9H0F5 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RNF38Q9H0F5 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC21.7■■□□□ 1.06
RNF38Q9H0F5 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
RNF38Q9H0F5 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RNF38Q9H0F5 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
RNF38Q9H0F5 BX276092.2-201ENST00000417668 665 ntBASIC21.7■■□□□ 1.06
RNF38Q9H0F5 PPP1R14BP2-201ENST00000426284 444 ntBASIC21.7■■□□□ 1.06
RNF38Q9H0F5 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RNF38Q9H0F5 AC245052.3-201ENST00000450182 901 ntBASIC21.7■■□□□ 1.06
RNF38Q9H0F5 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC21.7■■□□□ 1.06
RNF38Q9H0F5 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC21.7■■□□□ 1.06
RNF38Q9H0F5 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC21.7■■□□□ 1.06
RNF38Q9H0F5 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
RNF38Q9H0F5 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
RNF38Q9H0F5 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RNF38Q9H0F5 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
RNF38Q9H0F5 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC21.69■■□□□ 1.06
RNF38Q9H0F5 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC21.69■■□□□ 1.06
RNF38Q9H0F5 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.69■■□□□ 1.06
RNF38Q9H0F5 ABHD17AP1-201ENST00000358206 933 ntBASIC21.69■■□□□ 1.06
RNF38Q9H0F5 PBX1-209ENST00000485769 834 ntTSL 2 BASIC21.69■■□□□ 1.06
RNF38Q9H0F5 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC21.69■■□□□ 1.06
RNF38Q9H0F5 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC21.69■■□□□ 1.06
RNF38Q9H0F5 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RNF38Q9H0F5 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
RNF38Q9H0F5 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
RNF38Q9H0F5 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC21.69■■□□□ 1.06
RNF38Q9H0F5 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RNF38Q9H0F5 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RNF38Q9H0F5 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC21.69■■□□□ 1.06
RNF38Q9H0F5 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RNF38Q9H0F5 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21.69■■□□□ 1.06
RNF38Q9H0F5 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
RNF38Q9H0F5 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RNF38Q9H0F5 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RNF38Q9H0F5 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RNF38Q9H0F5 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC21.68■■□□□ 1.06
RNF38Q9H0F5 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC21.68■■□□□ 1.06
RNF38Q9H0F5 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
RNF38Q9H0F5 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RNF38Q9H0F5 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RNF38Q9H0F5 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.68■■□□□ 1.06
RNF38Q9H0F5 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
RNF38Q9H0F5 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms