Protein–RNA interactions for Protein: Q9BYQ7

KRTAP4-1, Keratin-associated protein 4-1, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-1Q9BYQ7 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC10.94□□□□□ -0.66
KRTAP4-1Q9BYQ7 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC10.94□□□□□ -0.66
KRTAP4-1Q9BYQ7 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
KRTAP4-1Q9BYQ7 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC10.94□□□□□ -0.66
KRTAP4-1Q9BYQ7 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
KRTAP4-1Q9BYQ7 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
KRTAP4-1Q9BYQ7 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
KRTAP4-1Q9BYQ7 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
KRTAP4-1Q9BYQ7 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
KRTAP4-1Q9BYQ7 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
KRTAP4-1Q9BYQ7 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC10.94□□□□□ -0.66
KRTAP4-1Q9BYQ7 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
KRTAP4-1Q9BYQ7 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC10.94□□□□□ -0.66
KRTAP4-1Q9BYQ7 SNORA78-201ENST00000459373 127 ntBASIC10.94□□□□□ -0.66
KRTAP4-1Q9BYQ7 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
KRTAP4-1Q9BYQ7 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC10.94□□□□□ -0.66
KRTAP4-1Q9BYQ7 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC10.94□□□□□ -0.66
KRTAP4-1Q9BYQ7 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC10.94□□□□□ -0.66
KRTAP4-1Q9BYQ7 RNF121-214ENST00000533380 870 ntTSL 3 BASIC10.94□□□□□ -0.66
KRTAP4-1Q9BYQ7 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC10.94□□□□□ -0.66
KRTAP4-1Q9BYQ7 RN7SL471P-201ENST00000580476 299 ntBASIC10.94□□□□□ -0.66
KRTAP4-1Q9BYQ7 MIR4497-201ENST00000583208 89 ntBASIC10.94□□□□□ -0.66
KRTAP4-1Q9BYQ7 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
KRTAP4-1Q9BYQ7 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
KRTAP4-1Q9BYQ7 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC10.94□□□□□ -0.66
KRTAP4-1Q9BYQ7 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
KRTAP4-1Q9BYQ7 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
KRTAP4-1Q9BYQ7 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC10.94□□□□□ -0.66
KRTAP4-1Q9BYQ7 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
KRTAP4-1Q9BYQ7 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
KRTAP4-1Q9BYQ7 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC10.94□□□□□ -0.66
KRTAP4-1Q9BYQ7 AC080038.3-201ENST00000623346 1952 ntBASIC10.94□□□□□ -0.66
KRTAP4-1Q9BYQ7 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
KRTAP4-1Q9BYQ7 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
KRTAP4-1Q9BYQ7 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
KRTAP4-1Q9BYQ7 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC10.93□□□□□ -0.66
KRTAP4-1Q9BYQ7 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
KRTAP4-1Q9BYQ7 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
KRTAP4-1Q9BYQ7 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC10.93□□□□□ -0.66
KRTAP4-1Q9BYQ7 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC10.93□□□□□ -0.66
KRTAP4-1Q9BYQ7 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
KRTAP4-1Q9BYQ7 AC211429.1-201ENST00000415277 523 ntBASIC10.93□□□□□ -0.66
KRTAP4-1Q9BYQ7 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC10.93□□□□□ -0.66
KRTAP4-1Q9BYQ7 GXYLT1P3-201ENST00000453058 1193 ntBASIC10.93□□□□□ -0.66
KRTAP4-1Q9BYQ7 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC10.93□□□□□ -0.66
KRTAP4-1Q9BYQ7 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC10.93□□□□□ -0.66
KRTAP4-1Q9BYQ7 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC10.93□□□□□ -0.66
KRTAP4-1Q9BYQ7 SPIB-206ENST00000596074 847 ntTSL 2 BASIC10.93□□□□□ -0.66
KRTAP4-1Q9BYQ7 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC10.93□□□□□ -0.66
KRTAP4-1Q9BYQ7 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
KRTAP4-1Q9BYQ7 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC10.93□□□□□ -0.66
KRTAP4-1Q9BYQ7 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
KRTAP4-1Q9BYQ7 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
KRTAP4-1Q9BYQ7 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC10.93□□□□□ -0.66
KRTAP4-1Q9BYQ7 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC10.93□□□□□ -0.66
KRTAP4-1Q9BYQ7 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC10.93□□□□□ -0.66
KRTAP4-1Q9BYQ7 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC10.93□□□□□ -0.66
KRTAP4-1Q9BYQ7 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC10.93□□□□□ -0.66
KRTAP4-1Q9BYQ7 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC10.93□□□□□ -0.66
KRTAP4-1Q9BYQ7 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
KRTAP4-1Q9BYQ7 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
KRTAP4-1Q9BYQ7 GCK-205ENST00000437084 1385 ntTSL 5 BASIC10.92□□□□□ -0.66
KRTAP4-1Q9BYQ7 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC10.92□□□□□ -0.66
KRTAP4-1Q9BYQ7 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC10.92□□□□□ -0.66
KRTAP4-1Q9BYQ7 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
KRTAP4-1Q9BYQ7 AC092368.3-202ENST00000574180 1591 ntBASIC10.92□□□□□ -0.66
KRTAP4-1Q9BYQ7 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
KRTAP4-1Q9BYQ7 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
KRTAP4-1Q9BYQ7 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
KRTAP4-1Q9BYQ7 MFF-205ENST00000354503 1085 ntTSL 2 BASIC10.92□□□□□ -0.66
KRTAP4-1Q9BYQ7 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC10.92□□□□□ -0.66
KRTAP4-1Q9BYQ7 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
KRTAP4-1Q9BYQ7 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
KRTAP4-1Q9BYQ7 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
KRTAP4-1Q9BYQ7 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC10.92□□□□□ -0.66
KRTAP4-1Q9BYQ7 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC10.92□□□□□ -0.66
KRTAP4-1Q9BYQ7 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
KRTAP4-1Q9BYQ7 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
KRTAP4-1Q9BYQ7 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
KRTAP4-1Q9BYQ7 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC10.92□□□□□ -0.66
KRTAP4-1Q9BYQ7 SOX15-203ENST00000570788 1093 ntBASIC10.92□□□□□ -0.66
KRTAP4-1Q9BYQ7 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC10.92□□□□□ -0.66
KRTAP4-1Q9BYQ7 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
KRTAP4-1Q9BYQ7 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC10.92□□□□□ -0.66
KRTAP4-1Q9BYQ7 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
KRTAP4-1Q9BYQ7 AC100791.3-201ENST00000617619 330 ntBASIC10.92□□□□□ -0.66
KRTAP4-1Q9BYQ7 FAM197Y4-202ENST00000622692 608 ntBASIC10.92□□□□□ -0.66
KRTAP4-1Q9BYQ7 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
KRTAP4-1Q9BYQ7 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
KRTAP4-1Q9BYQ7 AC068473.5-201ENST00000616428 2072 ntBASIC10.92□□□□□ -0.66
KRTAP4-1Q9BYQ7 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
KRTAP4-1Q9BYQ7 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC10.92□□□□□ -0.66
KRTAP4-1Q9BYQ7 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC10.92□□□□□ -0.66
KRTAP4-1Q9BYQ7 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
KRTAP4-1Q9BYQ7 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC10.91□□□□□ -0.66
KRTAP4-1Q9BYQ7 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
KRTAP4-1Q9BYQ7 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
KRTAP4-1Q9BYQ7 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
KRTAP4-1Q9BYQ7 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
KRTAP4-1Q9BYQ7 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms