Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
LCE3DQ9BYE3 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC5.64□□□□□ -1.51
LCE3DQ9BYE3 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
LCE3DQ9BYE3 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
LCE3DQ9BYE3 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
LCE3DQ9BYE3 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
LCE3DQ9BYE3 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC5.64□□□□□ -1.51
LCE3DQ9BYE3 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC5.64□□□□□ -1.51
LCE3DQ9BYE3 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
LCE3DQ9BYE3 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC5.64□□□□□ -1.51
LCE3DQ9BYE3 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
LCE3DQ9BYE3 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
LCE3DQ9BYE3 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC5.64□□□□□ -1.51
LCE3DQ9BYE3 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
LCE3DQ9BYE3 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC5.64□□□□□ -1.51
LCE3DQ9BYE3 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC5.64□□□□□ -1.51
LCE3DQ9BYE3 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC5.64□□□□□ -1.51
LCE3DQ9BYE3 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC5.64□□□□□ -1.51
LCE3DQ9BYE3 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
LCE3DQ9BYE3 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC5.64□□□□□ -1.51
LCE3DQ9BYE3 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
LCE3DQ9BYE3 MFF-203ENST00000349901 1716 ntTSL 2 BASIC5.64□□□□□ -1.51
LCE3DQ9BYE3 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
LCE3DQ9BYE3 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
LCE3DQ9BYE3 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC5.64□□□□□ -1.51
LCE3DQ9BYE3 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
LCE3DQ9BYE3 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
LCE3DQ9BYE3 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC5.64□□□□□ -1.51
LCE3DQ9BYE3 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
LCE3DQ9BYE3 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
LCE3DQ9BYE3 REST-206ENST00000612429 1376 ntTSL 5 BASIC5.64□□□□□ -1.51
LCE3DQ9BYE3 REST-207ENST00000616975 1370 ntTSL 5 BASIC5.64□□□□□ -1.51
LCE3DQ9BYE3 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
LCE3DQ9BYE3 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
LCE3DQ9BYE3 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
LCE3DQ9BYE3 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
LCE3DQ9BYE3 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC5.64□□□□□ -1.51
LCE3DQ9BYE3 GABARAPL3-202ENST00000624044 1851 ntBASIC5.64□□□□□ -1.51
LCE3DQ9BYE3 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
LCE3DQ9BYE3 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
LCE3DQ9BYE3 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC5.64□□□□□ -1.51
LCE3DQ9BYE3 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC5.64□□□□□ -1.51
LCE3DQ9BYE3 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
LCE3DQ9BYE3 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
LCE3DQ9BYE3 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
LCE3DQ9BYE3 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
LCE3DQ9BYE3 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
LCE3DQ9BYE3 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
LCE3DQ9BYE3 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC5.64□□□□□ -1.51
LCE3DQ9BYE3 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
LCE3DQ9BYE3 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
LCE3DQ9BYE3 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
LCE3DQ9BYE3 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
LCE3DQ9BYE3 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
LCE3DQ9BYE3 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC5.63□□□□□ -1.51
LCE3DQ9BYE3 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
LCE3DQ9BYE3 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
LCE3DQ9BYE3 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
LCE3DQ9BYE3 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
LCE3DQ9BYE3 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC5.63□□□□□ -1.51
LCE3DQ9BYE3 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
LCE3DQ9BYE3 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
LCE3DQ9BYE3 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
LCE3DQ9BYE3 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
LCE3DQ9BYE3 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
LCE3DQ9BYE3 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
LCE3DQ9BYE3 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
LCE3DQ9BYE3 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
LCE3DQ9BYE3 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC5.63□□□□□ -1.51
LCE3DQ9BYE3 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC5.63□□□□□ -1.51
LCE3DQ9BYE3 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
LCE3DQ9BYE3 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC5.63□□□□□ -1.51
LCE3DQ9BYE3 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC5.63□□□□□ -1.51
LCE3DQ9BYE3 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
LCE3DQ9BYE3 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
LCE3DQ9BYE3 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
LCE3DQ9BYE3 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
LCE3DQ9BYE3 HYI-210ENST00000486909 905 ntTSL 5 BASIC5.63□□□□□ -1.51
LCE3DQ9BYE3 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC5.63□□□□□ -1.51
LCE3DQ9BYE3 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC5.63□□□□□ -1.51
LCE3DQ9BYE3 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
LCE3DQ9BYE3 SRP68-213ENST00000629930 165 ntTSL 5 BASIC5.63□□□□□ -1.51
LCE3DQ9BYE3 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC5.63□□□□□ -1.51
LCE3DQ9BYE3 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
LCE3DQ9BYE3 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
LCE3DQ9BYE3 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
LCE3DQ9BYE3 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
LCE3DQ9BYE3 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC5.63□□□□□ -1.51
LCE3DQ9BYE3 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
LCE3DQ9BYE3 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
LCE3DQ9BYE3 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
LCE3DQ9BYE3 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC5.63□□□□□ -1.51
LCE3DQ9BYE3 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
LCE3DQ9BYE3 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
LCE3DQ9BYE3 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
LCE3DQ9BYE3 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
LCE3DQ9BYE3 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
LCE3DQ9BYE3 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC5.63□□□□□ -1.51
LCE3DQ9BYE3 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
LCE3DQ9BYE3 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms