Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC15.79■□□□□ 0.12
VGLL1Q99990 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC15.79■□□□□ 0.12
VGLL1Q99990 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
VGLL1Q99990 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
VGLL1Q99990 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
VGLL1Q99990 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
VGLL1Q99990 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
VGLL1Q99990 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC15.78■□□□□ 0.12
VGLL1Q99990 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
VGLL1Q99990 ME2-216ENST00000639850 2331 ntTSL 5 BASIC15.78■□□□□ 0.12
VGLL1Q99990 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC15.78■□□□□ 0.12
VGLL1Q99990 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
VGLL1Q99990 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC15.78■□□□□ 0.12
VGLL1Q99990 NARF-205ENST00000412079 1760 ntTSL 5 BASIC15.78■□□□□ 0.12
VGLL1Q99990 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
VGLL1Q99990 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
VGLL1Q99990 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
VGLL1Q99990 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
VGLL1Q99990 SNX3-202ENST00000349379 890 ntTSL 2 BASIC15.78■□□□□ 0.12
VGLL1Q99990 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
VGLL1Q99990 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC15.78■□□□□ 0.12
VGLL1Q99990 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC15.78■□□□□ 0.12
VGLL1Q99990 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC15.78■□□□□ 0.12
VGLL1Q99990 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC15.78■□□□□ 0.12
VGLL1Q99990 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC15.78■□□□□ 0.12
VGLL1Q99990 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
VGLL1Q99990 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
VGLL1Q99990 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
VGLL1Q99990 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC15.78■□□□□ 0.12
VGLL1Q99990 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
VGLL1Q99990 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
VGLL1Q99990 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
VGLL1Q99990 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
VGLL1Q99990 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
VGLL1Q99990 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
VGLL1Q99990 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
VGLL1Q99990 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC15.77■□□□□ 0.12
VGLL1Q99990 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
VGLL1Q99990 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
VGLL1Q99990 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
VGLL1Q99990 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
VGLL1Q99990 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
VGLL1Q99990 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC15.77■□□□□ 0.12
VGLL1Q99990 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
VGLL1Q99990 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC15.77■□□□□ 0.12
VGLL1Q99990 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
VGLL1Q99990 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
VGLL1Q99990 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
VGLL1Q99990 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
VGLL1Q99990 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC15.77■□□□□ 0.12
VGLL1Q99990 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
VGLL1Q99990 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC15.77■□□□□ 0.12
VGLL1Q99990 SMUG1P1-201ENST00000590640 811 ntBASIC15.77■□□□□ 0.12
VGLL1Q99990 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
VGLL1Q99990 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
VGLL1Q99990 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC15.77■□□□□ 0.11
VGLL1Q99990 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
VGLL1Q99990 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
VGLL1Q99990 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
VGLL1Q99990 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
VGLL1Q99990 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC15.77■□□□□ 0.11
VGLL1Q99990 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
VGLL1Q99990 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
VGLL1Q99990 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.11
VGLL1Q99990 PLK5-205ENST00000642079 1969 ntBASIC15.76■□□□□ 0.11
VGLL1Q99990 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
VGLL1Q99990 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
VGLL1Q99990 AC006128.1-201ENST00000624704 1661 ntBASIC15.76■□□□□ 0.11
VGLL1Q99990 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
VGLL1Q99990 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
VGLL1Q99990 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC15.76■□□□□ 0.11
VGLL1Q99990 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC15.76■□□□□ 0.11
VGLL1Q99990 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
VGLL1Q99990 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
VGLL1Q99990 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC15.76■□□□□ 0.11
VGLL1Q99990 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC15.76■□□□□ 0.11
VGLL1Q99990 PTMA-205ENST00000410064 814 ntTSL 2 BASIC15.76■□□□□ 0.11
VGLL1Q99990 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC15.76■□□□□ 0.11
VGLL1Q99990 AC131281.2-201ENST00000520478 145 ntBASIC15.76■□□□□ 0.11
VGLL1Q99990 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
VGLL1Q99990 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC15.76■□□□□ 0.11
VGLL1Q99990 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC15.76■□□□□ 0.11
VGLL1Q99990 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC15.76■□□□□ 0.11
VGLL1Q99990 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC15.76■□□□□ 0.11
VGLL1Q99990 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC15.76■□□□□ 0.11
VGLL1Q99990 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
VGLL1Q99990 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
VGLL1Q99990 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
VGLL1Q99990 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
VGLL1Q99990 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
VGLL1Q99990 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
VGLL1Q99990 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC15.76■□□□□ 0.11
VGLL1Q99990 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
VGLL1Q99990 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC15.76■□□□□ 0.11
VGLL1Q99990 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
VGLL1Q99990 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
VGLL1Q99990 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC15.75■□□□□ 0.11
VGLL1Q99990 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC15.75■□□□□ 0.11
VGLL1Q99990 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
VGLL1Q99990 ASL-203ENST00000380839 1765 ntTSL 5 BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms