Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
NPAS1Q99742 UBE2DNL-204ENST00000602536 740 ntBASIC19.04■□□□□ 0.64
NPAS1Q99742 AL137060.1-201ENST00000618151 2648 ntBASIC19.04■□□□□ 0.64
NPAS1Q99742 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
NPAS1Q99742 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.04■□□□□ 0.64
NPAS1Q99742 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.04■□□□□ 0.64
NPAS1Q99742 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
NPAS1Q99742 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
NPAS1Q99742 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NPAS1Q99742 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
NPAS1Q99742 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NPAS1Q99742 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NPAS1Q99742 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NPAS1Q99742 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.03■□□□□ 0.64
NPAS1Q99742 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NPAS1Q99742 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.03■□□□□ 0.64
NPAS1Q99742 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
NPAS1Q99742 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.03■□□□□ 0.64
NPAS1Q99742 AC137761.2-201ENST00000561729 223 ntBASIC19.03■□□□□ 0.64
NPAS1Q99742 AC145350.3-201ENST00000569033 163 ntBASIC19.03■□□□□ 0.64
NPAS1Q99742 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC19.03■□□□□ 0.64
NPAS1Q99742 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
NPAS1Q99742 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
NPAS1Q99742 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
NPAS1Q99742 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
NPAS1Q99742 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
NPAS1Q99742 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
NPAS1Q99742 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
NPAS1Q99742 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
NPAS1Q99742 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
NPAS1Q99742 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.02■□□□□ 0.64
NPAS1Q99742 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NPAS1Q99742 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NPAS1Q99742 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NPAS1Q99742 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
NPAS1Q99742 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
NPAS1Q99742 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.02■□□□□ 0.64
NPAS1Q99742 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NPAS1Q99742 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
NPAS1Q99742 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
NPAS1Q99742 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.02■□□□□ 0.63
NPAS1Q99742 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.01■□□□□ 0.63
NPAS1Q99742 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
NPAS1Q99742 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
NPAS1Q99742 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NPAS1Q99742 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
NPAS1Q99742 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
NPAS1Q99742 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
NPAS1Q99742 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
NPAS1Q99742 AC006015.1-201ENST00000429970 570 ntBASIC19.01■□□□□ 0.63
NPAS1Q99742 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.01■□□□□ 0.63
NPAS1Q99742 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
NPAS1Q99742 AC092666.2-201ENST00000613287 246 ntBASIC19.01■□□□□ 0.63
NPAS1Q99742 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
NPAS1Q99742 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NPAS1Q99742 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
NPAS1Q99742 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.01■□□□□ 0.63
NPAS1Q99742 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NPAS1Q99742 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NPAS1Q99742 AC005229.4-201ENST00000610085 2198 ntBASIC19■□□□□ 0.63
NPAS1Q99742 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19■□□□□ 0.63
NPAS1Q99742 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
NPAS1Q99742 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19■□□□□ 0.63
NPAS1Q99742 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19■□□□□ 0.63
NPAS1Q99742 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
NPAS1Q99742 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NPAS1Q99742 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19■□□□□ 0.63
NPAS1Q99742 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19■□□□□ 0.63
NPAS1Q99742 GLI3-203ENST00000437480 451 ntTSL 2 BASIC19■□□□□ 0.63
NPAS1Q99742 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19■□□□□ 0.63
NPAS1Q99742 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
NPAS1Q99742 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19■□□□□ 0.63
NPAS1Q99742 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NPAS1Q99742 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
NPAS1Q99742 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NPAS1Q99742 FEM1AP4-201ENST00000443167 1987 ntBASIC19■□□□□ 0.63
NPAS1Q99742 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NPAS1Q99742 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
NPAS1Q99742 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19■□□□□ 0.63
NPAS1Q99742 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
NPAS1Q99742 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NPAS1Q99742 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NPAS1Q99742 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NPAS1Q99742 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.99■□□□□ 0.63
NPAS1Q99742 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
NPAS1Q99742 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC18.99■□□□□ 0.63
NPAS1Q99742 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NPAS1Q99742 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NPAS1Q99742 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NPAS1Q99742 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
NPAS1Q99742 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NPAS1Q99742 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
NPAS1Q99742 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC18.99■□□□□ 0.63
NPAS1Q99742 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC18.99■□□□□ 0.63
NPAS1Q99742 SPI1-203ENST00000533030 661 ntTSL 2 BASIC18.99■□□□□ 0.63
NPAS1Q99742 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC18.99■□□□□ 0.63
NPAS1Q99742 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC18.99■□□□□ 0.63
NPAS1Q99742 AC011767.1-201ENST00000617410 1153 ntBASIC18.99■□□□□ 0.63
NPAS1Q99742 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC18.99■□□□□ 0.63
NPAS1Q99742 WWOX-218ENST00000627394 894 ntTSL 5 BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms