Protein–RNA interactions for Protein: Q99325

ATG40, Autophagy-related protein 40, yeastyeast

Predictions only

Length 256 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
ATG40Q99325 TMN3YER113C 2121 nt2□□□□□ -2.09
ATG40Q99325 ENP2YGR145W 2124 nt2□□□□□ -2.09
ATG40Q99325 STN1YDR082W 1485 nt2□□□□□ -2.09
ATG40Q99325 YPK1YKL126W 2043 nt2□□□□□ -2.09
ATG40Q99325 FAR11YNL127W 2862 nt2□□□□□ -2.09
ATG40Q99325 UBP15YMR304W 3693 nt1.99□□□□□ -2.09
ATG40Q99325 SMY2YBR172C 2223 nt1.99□□□□□ -2.09
ATG40Q99325 YKU80YMR106C 1890 nt1.99□□□□□ -2.09
ATG40Q99325 RRP14YKL082C 1305 nt1.99□□□□□ -2.09
ATG40Q99325 SAK1YER129W 3429 nt1.99□□□□□ -2.09
ATG40Q99325 SST2YLR452C 2097 nt1.99□□□□□ -2.09
ATG40Q99325 AI3Q0060 1248 nt1.99□□□□□ -2.09
ATG40Q99325 PRE1YER012W 597 nt1.99□□□□□ -2.09
ATG40Q99325 YGL159WYGL159W 1113 nt1.99□□□□□ -2.09
ATG40Q99325 ATG34YOL083W 1239 nt1.99□□□□□ -2.09
ATG40Q99325 YOR387CYOR387C 621 nt1.99□□□□□ -2.09
ATG40Q99325 BTS1YPL069C 1008 nt1.99□□□□□ -2.09
ATG40Q99325 LTP1YPR073C 486 nt1.99□□□□□ -2.09
ATG40Q99325 DPB3YBR278W 606 nt1.99□□□□□ -2.09
ATG40Q99325 NUP170YBL079W 4509 nt1.99□□□□□ -2.09
ATG40Q99325 YDR261W-BYDR261W-B 5313 nt1.99□□□□□ -2.09
ATG40Q99325 YFL002W-AYFL002W-A 5313 nt1.99□□□□□ -2.09
ATG40Q99325 YGR161W-BYGR161W-B 5313 nt1.99□□□□□ -2.09
ATG40Q99325 YCL019WYCL019W 5313 nt1.99□□□□□ -2.09
ATG40Q99325 PHO2YDL106C 1680 nt1.99□□□□□ -2.09
ATG40Q99325 MSH4YFL003C 2637 nt1.99□□□□□ -2.09
ATG40Q99325 YDR061WYDR061W 1620 nt1.99□□□□□ -2.09
ATG40Q99325 MSB1YOR188W 3414 nt1.98□□□□□ -2.09
ATG40Q99325 YBT1YLL048C 4986 nt1.98□□□□□ -2.09
ATG40Q99325 YCR024C-BYCR024C-B 267 nt1.98□□□□□ -2.09
ATG40Q99325 HLR1YDR528W 1272 nt1.98□□□□□ -2.09
ATG40Q99325 PEX4YGR133W 552 nt1.98□□□□□ -2.09
ATG40Q99325 IMP3YHR148W 552 nt1.98□□□□□ -2.09
ATG40Q99325 YJR020WYJR020W 333 nt1.98□□□□□ -2.09
ATG40Q99325 ARC19YKL013C 516 nt1.98□□□□□ -2.09
ATG40Q99325 YKL070WYKL070W 510 nt1.98□□□□□ -2.09
ATG40Q99325 MCR1YKL150W 909 nt1.98□□□□□ -2.09
ATG40Q99325 ECM13YBL043W 774 nt1.98□□□□□ -2.09
ATG40Q99325 AI4Q0065 1671 nt1.98□□□□□ -2.09
ATG40Q99325 YBR259WYBR259W 2067 nt1.98□□□□□ -2.09
ATG40Q99325 21S_rRNA21S_rRNA 3296 nt1.98□□□□□ -2.09
ATG40Q99325 ISW1YBR245C 3390 nt1.98□□□□□ -2.09
ATG40Q99325 AVT5YBL089W 1380 nt1.98□□□□□ -2.09
ATG40Q99325 MRM2YGL136C 963 nt1.97□□□□□ -2.09
ATG40Q99325 CDC123YLR215C 1083 nt1.97□□□□□ -2.09
ATG40Q99325 BET5YML077W 480 nt1.97□□□□□ -2.09
ATG40Q99325 YNR068CYNR068C 819 nt1.97□□□□□ -2.09
ATG40Q99325 IRC14YOR135C 342 nt1.97□□□□□ -2.09
ATG40Q99325 HAT1YPL001W 1125 nt1.97□□□□□ -2.09
ATG40Q99325 PIS1YPR113W 663 nt1.97□□□□□ -2.09
ATG40Q99325 snR43snR43 209 nt1.97□□□□□ -2.09
ATG40Q99325 AVT2YEL064C 1443 nt1.97□□□□□ -2.09
ATG40Q99325 TOP2YNL088W 4287 nt1.97□□□□□ -2.09
ATG40Q99325 TOR2YKL203C 7425 nt1.97□□□□□ -2.09
ATG40Q99325 OSW7YFR039C 1533 nt1.96□□□□□ -2.09
ATG40Q99325 KAP123YER110C 3342 nt1.96□□□□□ -2.1
ATG40Q99325 YIL080WYIL080W 4722 nt1.96□□□□□ -2.1
ATG40Q99325 AI2Q0055 2565 nt1.96□□□□□ -2.1
ATG40Q99325 HMO1YDR174W 741 nt1.96□□□□□ -2.1
ATG40Q99325 GET1YGL020C 708 nt1.96□□□□□ -2.1
ATG40Q99325 LAC1YKL008C 1257 nt1.96□□□□□ -2.1
ATG40Q99325 HOT13YKL084W 351 nt1.96□□□□□ -2.1
ATG40Q99325 OMA1YKR087C 1038 nt1.96□□□□□ -2.1
ATG40Q99325 RIF2YLR453C 1188 nt1.96□□□□□ -2.1
ATG40Q99325 VMA9YCL005W-A 222 nt1.96□□□□□ -2.1
ATG40Q99325 TOF1YNL273W 3717 nt1.96□□□□□ -2.1
ATG40Q99325 YNL011CYNL011C 1335 nt1.95□□□□□ -2.1
ATG40Q99325 SNX41YDR425W 1878 nt1.95□□□□□ -2.1
ATG40Q99325 ORC2YBR060C 1863 nt1.95□□□□□ -2.1
ATG40Q99325 FMN1YDR236C 657 nt1.95□□□□□ -2.1
ATG40Q99325 YHR182C-AYHR182C-A 474 nt1.95□□□□□ -2.1
ATG40Q99325 YJR071WYJR071W 369 nt1.95□□□□□ -2.1
ATG40Q99325 PSY3YLR376C 729 nt1.95□□□□□ -2.1
ATG40Q99325 YMR075C-AYMR075C-A 366 nt1.95□□□□□ -2.1
ATG40Q99325 PEX17YNL214W 600 nt1.95□□□□□ -2.1
ATG40Q99325 YOL114CYOL114C 609 nt1.95□□□□□ -2.1
ATG40Q99325 DBF20YPR111W 1695 nt1.95□□□□□ -2.1
ATG40Q99325 YDR186CYDR186C 2634 nt1.95□□□□□ -2.1
ATG40Q99325 SMC6YLR383W 3345 nt1.94□□□□□ -2.1
ATG40Q99325 POL4YCR014C 1749 nt1.94□□□□□ -2.1
ATG40Q99325 YBL005W-AYBL005W-A 1323 nt1.94□□□□□ -2.1
ATG40Q99325 YMR046CYMR046C 1323 nt1.94□□□□□ -2.1
ATG40Q99325 PEX5YDR244W 1839 nt1.94□□□□□ -2.1
ATG40Q99325 YDR131CYDR131C 1671 nt1.94□□□□□ -2.1
ATG40Q99325 YDR320W-BYDR320W-B 138 nt1.94□□□□□ -2.1
ATG40Q99325 YGR168CYGR168C 1131 nt1.94□□□□□ -2.1
ATG40Q99325 MMF1YIL051C 438 nt1.94□□□□□ -2.1
ATG40Q99325 YLL047WYLL047W 384 nt1.94□□□□□ -2.1
ATG40Q99325 END3YNL084C 1050 nt1.94□□□□□ -2.1
ATG40Q99325 YNL171CYNL171C 369 nt1.94□□□□□ -2.1
ATG40Q99325 IZH4YOL101C 939 nt1.94□□□□□ -2.1
ATG40Q99325 YBR201C-AYBR201C-A 204 nt1.94□□□□□ -2.1
ATG40Q99325 RIT1YMR283C 1542 nt1.94□□□□□ -2.1
ATG40Q99325 YKL075CYKL075C 1353 nt1.94□□□□□ -2.1
ATG40Q99325 BUB1YGR188C 3066 nt1.94□□□□□ -2.1
ATG40Q99325 BOI1YBL085W 2943 nt1.94□□□□□ -2.1
ATG40Q99325 TAF2YCR042C 4224 nt1.93□□□□□ -2.1
ATG40Q99325 RRI1YDL216C 1323 nt1.93□□□□□ -2.1
ATG40Q99325 YNR066CYNR066C 1311 nt1.93□□□□□ -2.1
ATG40Q99325 IRC8YJL051W 2469 nt1.93□□□□□ -2.1
Retrieved 100 of 7,029 protein–RNA pairs in 18.3 ms