Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC17.42■□□□□ 0.38
GAFA1Q96PS6 PARP1-202ENST00000366792 553 ntTSL 3 BASIC17.42■□□□□ 0.38
GAFA1Q96PS6 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC17.42■□□□□ 0.38
GAFA1Q96PS6 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
GAFA1Q96PS6 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
GAFA1Q96PS6 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC17.42■□□□□ 0.38
GAFA1Q96PS6 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC17.42■□□□□ 0.38
GAFA1Q96PS6 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
GAFA1Q96PS6 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC17.42■□□□□ 0.38
GAFA1Q96PS6 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC17.42■□□□□ 0.38
GAFA1Q96PS6 SPI1-203ENST00000533030 661 ntTSL 2 BASIC17.42■□□□□ 0.38
GAFA1Q96PS6 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC17.42■□□□□ 0.38
GAFA1Q96PS6 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC17.42■□□□□ 0.38
GAFA1Q96PS6 TFG-210ENST00000620299 1289 ntTSL 5 BASIC17.42■□□□□ 0.38
GAFA1Q96PS6 MYCNOS-205ENST00000641950 531 ntBASIC17.42■□□□□ 0.38
GAFA1Q96PS6 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
GAFA1Q96PS6 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
GAFA1Q96PS6 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
GAFA1Q96PS6 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
GAFA1Q96PS6 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
GAFA1Q96PS6 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
GAFA1Q96PS6 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
GAFA1Q96PS6 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GAFA1Q96PS6 KRT18P11-201ENST00000435214 1283 ntBASIC17.41■□□□□ 0.38
GAFA1Q96PS6 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC17.41■□□□□ 0.38
GAFA1Q96PS6 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
GAFA1Q96PS6 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC17.41■□□□□ 0.38
GAFA1Q96PS6 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC17.41■□□□□ 0.38
GAFA1Q96PS6 SLC7A5P1-201ENST00000568957 537 ntBASIC17.41■□□□□ 0.38
GAFA1Q96PS6 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
GAFA1Q96PS6 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC17.41■□□□□ 0.38
GAFA1Q96PS6 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
GAFA1Q96PS6 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GAFA1Q96PS6 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
GAFA1Q96PS6 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
GAFA1Q96PS6 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
GAFA1Q96PS6 AF106564.1-201ENST00000607058 2553 ntBASIC17.4■□□□□ 0.38
GAFA1Q96PS6 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
GAFA1Q96PS6 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC17.4■□□□□ 0.38
GAFA1Q96PS6 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC17.4■□□□□ 0.38
GAFA1Q96PS6 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
GAFA1Q96PS6 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GAFA1Q96PS6 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GAFA1Q96PS6 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GAFA1Q96PS6 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC17.4■□□□□ 0.38
GAFA1Q96PS6 AC006015.1-201ENST00000429970 570 ntBASIC17.4■□□□□ 0.38
GAFA1Q96PS6 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
GAFA1Q96PS6 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
GAFA1Q96PS6 WWOX-218ENST00000627394 894 ntTSL 5 BASIC17.4■□□□□ 0.38
GAFA1Q96PS6 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
GAFA1Q96PS6 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.38
GAFA1Q96PS6 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
GAFA1Q96PS6 CLDN5-201ENST00000403084 2357 ntBASIC17.39■□□□□ 0.38
GAFA1Q96PS6 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC17.39■□□□□ 0.37
GAFA1Q96PS6 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
GAFA1Q96PS6 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC17.39■□□□□ 0.37
GAFA1Q96PS6 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC17.39■□□□□ 0.37
GAFA1Q96PS6 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
GAFA1Q96PS6 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
GAFA1Q96PS6 AL049796.1-201ENST00000565336 1766 ntBASIC17.39■□□□□ 0.37
GAFA1Q96PS6 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
GAFA1Q96PS6 GLI3-203ENST00000437480 451 ntTSL 2 BASIC17.39■□□□□ 0.37
GAFA1Q96PS6 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
GAFA1Q96PS6 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
GAFA1Q96PS6 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC17.39■□□□□ 0.37
GAFA1Q96PS6 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
GAFA1Q96PS6 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
GAFA1Q96PS6 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
GAFA1Q96PS6 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC17.39■□□□□ 0.37
GAFA1Q96PS6 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
GAFA1Q96PS6 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
GAFA1Q96PS6 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC17.38■□□□□ 0.37
GAFA1Q96PS6 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
GAFA1Q96PS6 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
GAFA1Q96PS6 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
GAFA1Q96PS6 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
GAFA1Q96PS6 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
GAFA1Q96PS6 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC17.38■□□□□ 0.37
GAFA1Q96PS6 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
GAFA1Q96PS6 AC245052.3-201ENST00000450182 901 ntBASIC17.38■□□□□ 0.37
GAFA1Q96PS6 BRI3-207ENST00000539286 699 ntTSL 2 BASIC17.38■□□□□ 0.37
GAFA1Q96PS6 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC17.38■□□□□ 0.37
GAFA1Q96PS6 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC17.38■□□□□ 0.37
GAFA1Q96PS6 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC17.38■□□□□ 0.37
GAFA1Q96PS6 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC17.38■□□□□ 0.37
GAFA1Q96PS6 IKBKGP1-201ENST00000612193 1073 ntBASIC17.38■□□□□ 0.37
GAFA1Q96PS6 FGF8-207ENST00000618991 856 ntTSL 3 BASIC17.38■□□□□ 0.37
GAFA1Q96PS6 RARRES2P11-201ENST00000635158 484 ntBASIC17.38■□□□□ 0.37
GAFA1Q96PS6 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC17.38■□□□□ 0.37
GAFA1Q96PS6 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
GAFA1Q96PS6 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
GAFA1Q96PS6 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
GAFA1Q96PS6 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
GAFA1Q96PS6 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
GAFA1Q96PS6 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
GAFA1Q96PS6 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
GAFA1Q96PS6 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
GAFA1Q96PS6 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
GAFA1Q96PS6 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC17.37■□□□□ 0.37
GAFA1Q96PS6 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms