Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.05■□□□□ 0.8
SLC46A1Q96NT5 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SLC46A1Q96NT5 MMD2-204ENST00000612910 778 ntTSL 5 BASIC20.05■□□□□ 0.8
SLC46A1Q96NT5 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.05■□□□□ 0.8
SLC46A1Q96NT5 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
SLC46A1Q96NT5 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SLC46A1Q96NT5 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
SLC46A1Q96NT5 ECEL1P1-201ENST00000373592 1742 ntBASIC20.05■□□□□ 0.8
SLC46A1Q96NT5 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.04■□□□□ 0.8
SLC46A1Q96NT5 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
SLC46A1Q96NT5 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.04■□□□□ 0.8
SLC46A1Q96NT5 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
SLC46A1Q96NT5 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.04■□□□□ 0.8
SLC46A1Q96NT5 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC46A1Q96NT5 AL596275.1-201ENST00000423464 877 ntBASIC20.04■□□□□ 0.8
SLC46A1Q96NT5 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC46A1Q96NT5 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC46A1Q96NT5 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC20.04■□□□□ 0.8
SLC46A1Q96NT5 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.04■□□□□ 0.8
SLC46A1Q96NT5 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC20.04■□□□□ 0.8
SLC46A1Q96NT5 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.04■□□□□ 0.8
SLC46A1Q96NT5 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.04■□□□□ 0.8
SLC46A1Q96NT5 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC46A1Q96NT5 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC46A1Q96NT5 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.04■□□□□ 0.8
SLC46A1Q96NT5 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC46A1Q96NT5 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SLC46A1Q96NT5 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SLC46A1Q96NT5 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SLC46A1Q96NT5 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.03■□□□□ 0.8
SLC46A1Q96NT5 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
SLC46A1Q96NT5 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.03■□□□□ 0.8
SLC46A1Q96NT5 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.03■□□□□ 0.8
SLC46A1Q96NT5 AC026366.1-201ENST00000488803 879 ntBASIC20.03■□□□□ 0.8
SLC46A1Q96NT5 UNC93B5-201ENST00000530315 699 ntBASIC20.03■□□□□ 0.8
SLC46A1Q96NT5 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC20.03■□□□□ 0.8
SLC46A1Q96NT5 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.03■□□□□ 0.8
SLC46A1Q96NT5 AC243732.1-201ENST00000612648 864 ntBASIC20.03■□□□□ 0.8
SLC46A1Q96NT5 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.03■□□□□ 0.8
SLC46A1Q96NT5 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.03■□□□□ 0.8
SLC46A1Q96NT5 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SLC46A1Q96NT5 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SLC46A1Q96NT5 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
SLC46A1Q96NT5 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SLC46A1Q96NT5 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SLC46A1Q96NT5 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
SLC46A1Q96NT5 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SLC46A1Q96NT5 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SLC46A1Q96NT5 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SLC46A1Q96NT5 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SLC46A1Q96NT5 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SLC46A1Q96NT5 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SLC46A1Q96NT5 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SLC46A1Q96NT5 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SLC46A1Q96NT5 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
SLC46A1Q96NT5 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
SLC46A1Q96NT5 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.02■□□□□ 0.8
SLC46A1Q96NT5 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.02■□□□□ 0.8
SLC46A1Q96NT5 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SLC46A1Q96NT5 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.02■□□□□ 0.8
SLC46A1Q96NT5 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SLC46A1Q96NT5 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SLC46A1Q96NT5 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.02■□□□□ 0.8
SLC46A1Q96NT5 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.02■□□□□ 0.8
SLC46A1Q96NT5 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SLC46A1Q96NT5 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SLC46A1Q96NT5 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
SLC46A1Q96NT5 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SLC46A1Q96NT5 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
SLC46A1Q96NT5 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
SLC46A1Q96NT5 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
SLC46A1Q96NT5 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SLC46A1Q96NT5 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
SLC46A1Q96NT5 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.02■□□□□ 0.79
SLC46A1Q96NT5 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SLC46A1Q96NT5 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SLC46A1Q96NT5 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SLC46A1Q96NT5 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SLC46A1Q96NT5 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.01■□□□□ 0.79
SLC46A1Q96NT5 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.01■□□□□ 0.79
SLC46A1Q96NT5 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.01■□□□□ 0.79
SLC46A1Q96NT5 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.01■□□□□ 0.79
SLC46A1Q96NT5 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SLC46A1Q96NT5 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SLC46A1Q96NT5 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.01■□□□□ 0.79
SLC46A1Q96NT5 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SLC46A1Q96NT5 AC092053.2-201ENST00000640557 1818 ntBASIC20■□□□□ 0.79
SLC46A1Q96NT5 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SLC46A1Q96NT5 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SLC46A1Q96NT5 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SLC46A1Q96NT5 SERPINH1P1-201ENST00000419794 1249 ntBASIC20■□□□□ 0.79
SLC46A1Q96NT5 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC20■□□□□ 0.79
SLC46A1Q96NT5 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20■□□□□ 0.79
SLC46A1Q96NT5 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20■□□□□ 0.79
SLC46A1Q96NT5 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20■□□□□ 0.79
SLC46A1Q96NT5 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20■□□□□ 0.79
SLC46A1Q96NT5 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
SLC46A1Q96NT5 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SLC46A1Q96NT5 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
SLC46A1Q96NT5 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms